Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01893 ATGTGGTGGTTTGGCAATTGGATTCACTCCTTCGATTCTCTGATGGCTCGTTTGGCATGGTGCAACATCTGCGAAAAAGGAGACGAGTACAATGACTCGTCGTTAATGAACTTGGAGATACTGGAGATGGCGGCGGAAGGTGGCTACGGGCGAGTGTTCCGGTGCCGCGATGTTGACTCCGGCGCACTCGTCGCCATGAAAGAGATCACTATAATCGGAATGAGCCAGGGTGTTCCGTCTGCGATCATCCGCGAAGTGTCGTTCCTCAAAGACCTCCACCATGACAACATCGTCAGGCTGCTTAGAGTCGGATTCACCGAAAACAGATATGTCAATCTTATCTTCGAGCATCTCGACTTCGACCTTCATGAATTCATTAGCAACAGTCGTTTTTCCAAGGATGCCTTGACTGTAAAGAGTTTCATGTACCAGATACTCTCTGCTGTGGAGTTCTGCCATTCGCGTAAAGTTCTGCATAGAGATTTGAAACCAAGGAATGTGCTGATTCATCAAGCTACAATGTTGATCAAACTGGCGGATTTTGGTTTGGCTAGAGAGTTTAGAGATGACATGATGTATTCTGAGAAGTTAGGAACTTCCTGGTACAGGGCACCTGAAGTCTTGTGTGACAATTATCAATATTCAGCTGCAATTGATTTGTGGTCTGTTGGCTGTATATTTGCTGAGATGGTACTTGGAGAACCTTTGTTCCAAATGATTAAAGCCCGGGATGAGTTAGACGCAATTTTCAGACTGTTAGGTACCCCCACAGAGGAAACATGGCCAGGAGTCTCGGGACTAATGCCTAACCTTCATCTCTTCCCGAATTTTCATCCATTGGGCCTGGAATCATTTCTTCCTGAACTGGAACGAAATGGCCTCAATCTTCTATCAAGAATGCTTTGCATGGACCCAAATAAAAGGATTTCTGCGACAGCTGCTCTAAAGCATCCTTACTTCATGGATGAGGATTTCAATTTTGGAGGAAAGCCAATGGAGCCGTTGATGAGATGCATTCCTTTTCCATGA 1029 0.4558 MWWFGNWIHSFDSLMARLAWCNICEKGDEYNDSSLMNLEILEMAAEGGYGRVFRCRDVDSGALVAMKEITIIGMSQGVPSAIIREVSFLKDLHHDNIVRLLRVGFTENRYVNLIFEHLDFDLHEFISNSRFSKDALTVKSFMYQILSAVEFCHSRKVLHRDLKPRNVLIHQATMLIKLADFGLAREFRDDMMYSEKLGTSWYRAPEVLCDNYQYSAAIDLWSVGCIFAEMVLGEPLFQMIKARDELDAIFRLLGTPTEETWPGVSGLMPNLHLFPNFHPLGLESFLPELERNGLNLLSRMLCMDPNKRISATAALKHPYFMDEDFNFGGKPMEPLMRCIPFP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01893 342 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Phco9g01893 342 SUPERFAMILY Protein kinase-like (PK-like) 39 322 IPR011009 -
Phco9g01893 342 ProSiteProfiles Protein kinase domain profile. 38 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01893 342 FunFam CMGC family protein kinase 120 326 - -
Phco9g01893 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Phco9g01893 342 Pfam Protein kinase domain 46 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01893 342 CDD STKc_CDK_like 39 320 - -
Phco9g01893 342 SMART serkin_6 38 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01893 342 PANTHER CELL DIVISION PROTEIN KINASE 38 321 - -
Phco9g01893 342 Gene3D Transferase(Phosphotransferase) domain 1 120 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01893 Phco-Chr9 43550141 43553951 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Phco9g01893 Pkinase 1.1e-67 CL0016