Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco9g01887 | ATGTCTCATTCTAACAACCCTACAATGCATTCCTCCACCACTTTCCTCCATGATCTTCCTCCTCTCAAGAGACTTCGACTCATTCAACAACAACAACATCAAACACTTCAAAATCACTTTTTTCACTCTACACCACAAACACACCAAAATCACTTTTTTCACTCTTCACCTTTACCCGCCAAAAAACGCAAAGAGTCTCGAACCCCTTCTCCACCCTCTACTACCCTTCACAACTTTTCTCTCCCCGCCAAAAAACGAGTGTGGGCCCCACACCCCCAAAGTCCCAATTCCTCAAACGACACCGTTCCCACTTCGGAGACCACGCCCTCCTCAAACGACGCGGTTTCTCCTGCCTTCGATCTGAACATTGAATACAACCCCGACCTCGGAGAATCCGAAAATGGCGGCGATGACGACGACGGGGTTTTATGCTGCGTGTGCCAGAGCACGGACGGGGACCCTGAGGACCCGATTGTGTTCTGCGACGGGTGCAACCTCACGGTGCACGCATCCTGCTATGGGCACCCTCTATCGAAAGGCGTACCCGACGGAGACTGGTTCTGCGAACGGTGTCGTGTCGGAGAGGGCGGCGAGAGCAAAGGCTGCGCGTTGTGTCCCTCGAGTGAAGGTGCGATGAAGCGCACTGCGGAGGGTGCTTGGGCGCACGTGGTGTGCGCGCTGTTCGTGCCGGAGGTGTTTTTCCAGGACCCAGAAGGGAGGGAGGGGATCGACTGCTCCATGGTTCCGAAGAAGAGGTGGTCGCAAAGGTGCTACCTTTGCGAGTGCTGTGACGGTTGCGCTCTTGTGTGTTCTGAGCCAAAGTGTGGGTTGGCGTTTCATGTGACGTGCGCGCTGAAGAATGAGCTTTGGATTGAGTACAAGGAAGGGAAGAAAGGTGGCACCATTGTTGCTGGCTTCTGCAAGACGCACACCCAAATATGGGAAAAGCAACAGCAATCTGGGAAGTACAAAATTGTCCCTCTTGAAGATGAAAAGTAG | 999 | 0.5335 | MSHSNNPTMHSSTTFLHDLPPLKRLRLIQQQQHQTLQNHFFHSTPQTHQNHFFHSSPLPAKKRKESRTPSPPSTTLHNFSLPAKKRVWAPHPQSPNSSNDTVPTSETTPSSNDAVSPAFDLNIEYNPDLGESENGGDDDDGVLCCVCQSTDGDPEDPIVFCDGCNLTVHASCYGHPLSKGVPDGDWFCERCRVGEGGESKGCALCPSSEGAMKRTAEGAWAHVVCALFVPEVFFQDPEGREGIDCSMVPKKRWSQRCYLCECCDGCALVCSEPKCGLAFHVTCALKNELWIEYKEGKKGGTIVAGFCKTHTQIWEKQQQSGKYKIVPLEDEK | 332 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco9g01887 | 332 | MobiDBLite | consensus disorder prediction | 46 | 117 | - | - | |
| Phco9g01887 | 332 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 199 | 311 | IPR034732 | - | |
| Phco9g01887 | 332 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 197 | 313 | IPR013083 | - | |
| Phco9g01887 | 332 | ProSiteProfiles | Zinc finger PHD-type profile. | 141 | 194 | IPR019787 | - | |
| Phco9g01887 | 332 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 130 | 196 | IPR013083 | - | |
| Phco9g01887 | 332 | SUPERFAMILY | FYVE/PHD zinc finger | 132 | 204 | IPR011011 | - | |
| Phco9g01887 | 332 | Pfam | PHD-zinc-finger like domain | 202 | 309 | - | - | |
| Phco9g01887 | 332 | PANTHER | PHD FINGER PROTEINS | 134 | 311 | - | - | |
| Phco9g01887 | 332 | MobiDBLite | consensus disorder prediction | 91 | 117 | - | - | |
| Phco9g01887 | 332 | Pfam | PHD-finger | 144 | 192 | IPR019787 | - | |
| Phco9g01887 | 332 | CDD | PHD_BRPF_JADE_like | 143 | 191 | - | - | |
| Phco9g01887 | 332 | ProSitePatterns | Zinc finger PHD-type signature. | 144 | 191 | IPR019786 | - | |
| Phco9g01887 | 332 | SMART | PHD_3 | 143 | 192 | IPR001965 | - | |
| Phco9g01887 | 332 | SMART | PHD_3 | 256 | 311 | IPR001965 | - |
Transcription factors information