Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01870 ATGGCCATTGTTCTTATTTGCAAGCTTTTATTACTCTTTTCTCAGATCTCCAATGCAGCTCTCACCATCACCCAGCTCCACCCACTTTCCGACGATGGCACCACCTTGGTTTCTGAGGATGGAACCTTCGAGTTGGGTTTCTTCTCTCCAGGGAGTTCCAATAACCGCTACGTCGGAATCTGGTACAGAAACATCCCTGTCAAAACAGTGGTTTGGGTGGCCAACCGCGACAATCCAATCACACGCAACAACTCAACCACAAACAAGATGGTCGTAACGCAAGACGGAAACCTCGTACTTCTCACCCAGAACGACACTCTTGTCTGGTCTGCAAATGCAACGAAGAAGGTTTCAAATCCAGTTGTGCAGCTCTTGGACTCTGGAAACCTTGTAATAAGAGATGCAAATGAAGACACTGTTTTTCTGTGGCAAAGCTTTGACTTTCCTTGTGACACACTGTTACCAGGGATGAAGCTAGGGTGGGACTTAGAAAGTGGTCTTAATCGGCGTCTCACTGCATGGAAAACATGGGATGATCCATCTTCAGGGGACTTTTCTTGGGGAGTGGAGTTAGGAAGCAATCCTGATATTGTGATGTGGAAGGCTCAAACTGAGTACTTCAGAACTGGACCTTATACTGGGAACATGTTCAGTGGAGTATATGGTCCCAGGAATAACCCTCTTTATGATTATGTTTTTGTGAATAAGAAAGATGAAGTGTATTACAGATACACTCTGAGAAATGCTTCAGTCATCACCATAATTGTGATGAACCAAACCCTTTATCTTCGTCATCGTGTTACGTGGATTCCTGAAGCCAAAGCTTGGACCATTTACCAGTCCTTGCCACGAGACAGTTGTGATGTGTACAACACTTGTGGACCCAATGGATATTGTGCCATTGCTGGCTCACCAATTTGCCAGTGCTTAGATGGGTTCGTGCCAAAATCGTCACAGCAGTGGAATGCAATGGATTGGAGACAAGGGTGTGTGCGAAGTGAAGAGTGGAAATGTGGTGTGAAGAATAAAGATGGTTTTCGTAGATTTGCTGGTATGAAATTGCCAAATACCACACATTCTTGGGTCAATGAAAGTATGACACTTGAGGAGTGTAAGGCTAAATGTTTGAAAAACTGTTCTTGCACTGCTTATTCCAATTTGGACACCAGAGGAGGAGGTAGTGGCTGCTCTATTTGGGTTGGAGATCTTTATGATCTGAGAGTTATAGAAAGTGGCCAAGATTTGTATGTTCGAATTGCCACTTCAGATACAGATGGTAAACACAGACAAAGGAAAAAGATAATCGTGGTGGCTTCAGTCACAACATCATTGGTGTTTGTGATGCTATTAACCTTCTGTATTTACATGACCAAACAAAAATATAAAGGAAAAATAAAAACAAAAATGGCCACAGAGGATCAAAATGAAGGAAAACAAGAAGATTTGGAGCTTCCTTCCTTTGATCTTACTACAGTGATTAGAGCCACTAATAACTTCTCAATTGAGAATAAGCTTGGTGAAGGTGGTTTTGGTCCTGTGTACAAGGGCACATTAGTAGATGGACAAGAAATTGCAATCAAAAGACTTTCACGAAGTTCAGGACAAGGATTGAAAGAATTTAGAAATGAGGTAATATTGTGTGCCAAACTTCAACATCGGAATCTTGTTAAGGTTATTGGTTATTGCATTGAACAAGAGGAGAAGATGCTGCTTTATGAATACATGCCCAACAAAAGTCTTGATTTAATTATTTTTGATTCATATAAAAGTAAGAATTTAGAGTGGCAAATACGCTTTAACATTTTGAATGCAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGGATCATACACAGAGATCTCAAAGCAAGTAATATTCTACTAGACAATGATATGAATCCAAAAATATCTGATTTTGGTCTCGCAAGAATATGTGGAAGTGATCAAGTCGAAGGAAGTACAAGCATCATAGTTGGAACTCATGGTTACATGGCACCAGAGTATGCTATTGATGGACTGTTCTCTACAAAATCGGATGTGTTTAGCTTTGGAGTGTTATTACTAGAAATTCTTAGTGGAAAGAAAAATAGAGTATTTACCTTCCAAGACAACAGTCATAACCTTATTGACCATGCTTGGAATTTGTGGAAAGAAGGTACTTCAGAGCAGTTGATTGATGCTTGTTTAGAAAACTCATATAATGTGTTTCAAGTTGTACGATGCATTCAAATTGGTCTTTTATGTCTACAACATCATCCAAATGATAGGCCAAACATGACATCAGTTGTTGTTATGTTGACCAGCGAGAATGCTTTACCTGAACTTAAGGAGCCTGGTTTCTTAATTAGAAGGGCCTCAAAAGATGGAGAAAATTCTTCTAATAGACAAACATCTTCTTCAATCAATGAAGTCTCTATCTCACTTTTAAATGCTAGATAA 2451 0.3974 MAIVLICKLLLLFSQISNAALTITQLHPLSDDGTTLVSEDGTFELGFFSPGSSNNRYVGIWYRNIPVKTVVWVANRDNPITRNNSTTNKMVVTQDGNLVLLTQNDTLVWSANATKKVSNPVVQLLDSGNLVIRDANEDTVFLWQSFDFPCDTLLPGMKLGWDLESGLNRRLTAWKTWDDPSSGDFSWGVELGSNPDIVMWKAQTEYFRTGPYTGNMFSGVYGPRNNPLYDYVFVNKKDEVYYRYTLRNASVITIIVMNQTLYLRHRVTWIPEAKAWTIYQSLPRDSCDVYNTCGPNGYCAIAGSPICQCLDGFVPKSSQQWNAMDWRQGCVRSEEWKCGVKNKDGFRRFAGMKLPNTTHSWVNESMTLEECKAKCLKNCSCTAYSNLDTRGGGSGCSIWVGDLYDLRVIESGQDLYVRIATSDTDGKHRQRKKIIVVASVTTSLVFVMLLTFCIYMTKQKYKGKIKTKMATEDQNEGKQEDLELPSFDLTTVIRATNNFSIENKLGEGGFGPVYKGTLVDGQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVKVIGYCIEQEEKMLLYEYMPNKSLDLIIFDSYKSKNLEWQIRFNILNAIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARICGSDQVEGSTSIIVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEILSGKKNRVFTFQDNSHNLIDHAWNLWKEGTSEQLIDACLENSYNVFQVVRCIQIGLLCLQHHPNDRPNMTSVVVMLTSENALPELKEPGFLIRRASKDGENSSNRQTSSSINEVSISLLNAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01870 816 Gene3D Phosphorylase Kinase; domain 1 458 574 - -
Phco9g01870 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 180 IPR036426 -
Phco9g01870 816 Gene3D Transferase(Phosphotransferase) domain 1 575 780 - -
Phco9g01870 816 SMART serkin_6 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01870 816 SUPERFAMILY Protein kinase-like (PK-like) 483 780 IPR011009 -
Phco9g01870 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 463 574 - -
Phco9g01870 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 16 146 - -
Phco9g01870 816 CDD PAN_AP_plant 341 420 - -
Phco9g01870 816 CDD STKc_IRAK 505 771 - -
Phco9g01870 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Phco9g01870 816 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Phco9g01870 816 Pfam S-locus glycoprotein domain 207 317 IPR000858 GO:0048544
Phco9g01870 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Phco9g01870 816 Pfam D-mannose binding lectin 69 175 IPR001480 -
Phco9g01870 816 Gene3D Hepatocyte Growth Factor 337 420 - -
Phco9g01870 816 Pfam PAN-like domain 338 406 IPR003609 -
Phco9g01870 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Phco9g01870 816 ProSiteProfiles Bulb-type lectin domain profile. 20 145 IPR001480 -
Phco9g01870 816 CDD B_lectin 32 149 IPR001480 -
Phco9g01870 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 761 - -
Phco9g01870 816 ProSiteProfiles PAN/Apple domain profile. 338 420 IPR003609 -
Phco9g01870 816 Gene3D - 15 146 IPR036426 -
Phco9g01870 816 SMART ntp_6 341 419 IPR003609 -
Phco9g01870 816 Pfam Protein tyrosine and serine/threonine kinase 500 769 IPR001245 GO:0004672|GO:0006468
Phco9g01870 816 Pfam Domain of unknown function (DUF3403) 772 816 IPR021820 GO:0004674
Phco9g01870 816 SMART blect_4 26 149 IPR001480 -
Phco9g01870 816 ProSiteProfiles Protein kinase domain profile. 499 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01870 Phco-Chr9 43298533 43303686 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01870 Pkinase 6.5e-46 CL0016