Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01835 ATGGCTGACATAGCGGGTCTGGTTGAGGCTGCAGGGGTGAGATTTAGTTCGTTGGAGCTTATTGGGCAGGGATCATTCGGCGACGTGTATAAAGGGTTTGACAAGGTGCTAAACAAAGAAGTTGCTATCAAAGTGATTGATTTGGAAGAATCAGAGGATGAAATAGAGGACATTCAGAAGGAAATTTCTGTTCTGTCGCAATGTCGATCTGCATACATTACTGAGTATTATGGTTCCTTTCTTAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTACTGCAATCAGGTCCCCCACTTGATGAAATGTCAATTGCTTGCATTCTACGGGATTTACTTCATGCAATTGATTACCTACATACTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTAACTGAGAATGGTGATGTAAAGGTTGCCGATTTTGGTGTTTCTGCACAGTTAACTAGAACCATATCAAGGAGAAAGACCTTTGTAGGAACACCATTTTGGATGGCACCTGAGGTTATTCAAAATTCAGAAGGATATAATGAAAAGGCAGATATCTGGTCTCTGGGGATTACTGCAATAGAGATGGCAAAAGGGGAGCCTCCACTTGCGGATCTTCATCCAATGAGAGTGCTTTTCATCATACCTCGAGACAATCCACCACAACTAGATGAACATTTTTCTCGCTATATGAAAGAATTTGTTTCATTGTGCTTGAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAAGAGCTTCTTAGACATCGTTTCATTCGGAATGCCAGGAAGAGTCCTAAGCTATTGGAGAGAATACGGGAGCGTCCAAAGTTCCAAATAAAGGAAGATGAGGCAACACCTAGAAATGCCCCAAGGGGGATGGGGGAAGCATCTGATACTATTAAGGTTGCGAAAGATTTAAGGGGTGATGACACTAATCAGCCTAGTGGCCAAGGTAAAACCCTGAAAAGTTCTGGGTGGGACTTCAGCATTAGTGGATCTCAGGGTACTGGAACCTTTCGTAGTGTTTCACGACCACCTCAGTTTAGAGATAAGAAAACTGAAGTTTCAAATCATCAGCTTACCCCAAAAAAAAGTCCTGAGAGTGGCTATCAGGGAGGATCTGGCAATAAAAATGAGTTGCTAGAGACTTCTTTTGGAAAAGATTTGGGAGTTCCCTACCATGATGAACATCTGGATAATCATCTTGAAGATGATGAGTTGTTTGGGAATGGATTAGGAACTGTTGTTGTTCGGTCTCCAAAAGGACAACAATCATCACTGTTTCGTGACCAAAGCTCCCGATCTAGCAGCAGCTATGCTTCTTTTGAAGATGTTTCTACTAGCGGAACTGTTGTTTTGCGTAGTCAACACGATGATTCTGATTCTCCACAGACCCCAATGTCCCGACTGGGACATAATAGCAGAAATTCAAATGCCTCATTTGAAGATAGTGCTACAAATCTTGCCGAGGCAAAGGCTGCTATCCAAGGTGGATTGAGGAAAATGAATGTCCGGGATAGATTTGCACTGGGAAAACTTAACAATGATGTACAGGAAAGCAGGAGAGAACATATGTCAACCAGCTCTGATTCTTCCAGACCATCTCGTGAATCCATTGATGCACAAAAGGGGAATTCAAGATCACAGTTTGCTATTGATGATGAAGAAAGTGCCAAAATAATCTCATCCTCTGCCCCCTTATCTGTTTTGCTTATTCCTTCATTAAAAGAGGCCACTGCTGAGGATCCAGAAGGGCCACTTATGCAAATTGTTATCAATGCTCTTGTAAACATGGAGAGGACAAAGCCCCAATCCTGTGATGCTCTAGTCAAAAATTTGCTTCAGCGTTTGGCAAGTTCAAAGGAATTATCATTGAAGGACCTGCAAGAACTGGCTGGTCGAATACTAAGCAAGACTAAGTCAGCTGAAGAAACCCGAAATGCAGAGACGGATCACAAGAAGAAACAAAACAAGGAACTTCATTCAAATAGCAATTTAAGCCCCCTCGCAAGATTTCTTCTCTCAAGATGGCAAGGACAAACCTCACGGGATCTAAATTCATCATGA 2094 0.4198 MADIAGLVEAAGVRFSSLELIGQGSFGDVYKGFDKVLNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSAYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRDNPPQLDEHFSRYMKEFVSLCLKKVPAERPSAKELLRHRFIRNARKSPKLLERIRERPKFQIKEDEATPRNAPRGMGEASDTIKVAKDLRGDDTNQPSGQGKTLKSSGWDFSISGSQGTGTFRSVSRPPQFRDKKTEVSNHQLTPKKSPESGYQGGSGNKNELLETSFGKDLGVPYHDEHLDNHLEDDELFGNGLGTVVVRSPKGQQSSLFRDQSSRSSSSYASFEDVSTSGTVVLRSQHDDSDSPQTPMSRLGHNSRNSNASFEDSATNLAEAKAAIQGGLRKMNVRDRFALGKLNNDVQESRREHMSTSSDSSRPSRESIDAQKGNSRSQFAIDDEESAKIISSSAPLSVLLIPSLKEATAEDPEGPLMQIVINALVNMERTKPQSCDALVKNLLQRLASSKELSLKDLQELAGRILSKTKSAEETRNAETDHKKKQNKELHSNSNLSPLARFLLSRWQGQTSRDLNSS 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01835 697 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01835 697 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Phco9g01835 697 SUPERFAMILY Protein kinase-like (PK-like) 14 302 IPR011009 -
Phco9g01835 697 MobiDBLite consensus disorder prediction 281 390 - -
Phco9g01835 697 MobiDBLite consensus disorder prediction 430 490 - -
Phco9g01835 697 MobiDBLite consensus disorder prediction 281 297 - -
Phco9g01835 697 MobiDBLite consensus disorder prediction 522 560 - -
Phco9g01835 697 Gene3D Transferase(Phosphotransferase) domain 1 13 300 - -
Phco9g01835 697 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01835 697 MobiDBLite consensus disorder prediction 540 557 - -
Phco9g01835 697 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Phco9g01835 697 Coils Coil 41 68 - -
Phco9g01835 697 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 12 642 - -
Phco9g01835 697 MobiDBLite consensus disorder prediction 648 669 - -
Phco9g01835 697 MobiDBLite consensus disorder prediction 368 390 - -
Phco9g01835 697 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01835 697 CDD STKc_MST3_like 14 287 - -
Phco9g01835 697 MobiDBLite consensus disorder prediction 319 352 - -
Phco9g01835 697 MobiDBLite consensus disorder prediction 525 539 - -
Phco9g01835 697 MobiDBLite consensus disorder prediction 648 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01835 Phco-Chr9 42691053 42709699 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Phco9g01835 Pkinase 3e-67 CL0016