Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01816 ATGGCTAGCATTGGAAGAATACATCATGTGAATGTGGTACATTTCATTGGATATTGTGCTGAAGGAGAAAAGCGTGCTCTTGTTTATGAGTACATGCCAAATGGTTCATTGGATAAATACACCTTCTCCAAAGAGGAAAATATCCTTTTAAGTTATGAGAAAACATATGAAATATTTCTTGGCATAGCTCATGGGATTGGCTGTGATGTGCAAATTCTGTATTTTAATATTAAGCCTCATAATATTCTAGATGATGACTTCATTCCAAAGATTTCAGATTTTGGACTTGCAAAGCTATATCCTGTCAAAGATACGTCTCTTGCTTTAACTATGGCTAGAGGAACTTTAGGTTACATGGCTCTAGAATTATTCTACAATAATATTGGTGGAGTATCCAATAAGACCGATGTGTATAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTAGGAGAAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACAGTACTTCCCCTTTTGGATATATGATCAAATTAAAGATGAAAAAGAGACTCACATAGAAGATGTCCCAGAAGAGGATAAGATTTTGGTGAAAAAAATGCAAAGGTTTAGAACTCTTGAGTTCAGTTTTACAACCAAGTTTGCTTCCATGCTTTGCAGCACAGACCATAATTACTCATTTTTCACTCTTCGTTAA 684 0.3538 MASIGRIHHVNVVHFIGYCAEGEKRALVYEYMPNGSLDKYTFSKEENILLSYEKTYEIFLGIAHGIGCDVQILYFNIKPHNILDDDFIPKISDFGLAKLYPVKDTSLALTMARGTLGYMALELFYNNIGGVSNKTDVYSFGMLLMEMGSRRRNSNPHAEHSSQQYFPFWIYDQIKDEKETHIEDVPEEDKILVKKMQRFRTLEFSFTTKFASMLCSTDHNYSFFTLR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01816 227 Gene3D Transferase(Phosphotransferase) domain 1 1 207 - -
Phco9g01816 227 SUPERFAMILY Protein kinase-like (PK-like) 4 180 IPR011009 -
Phco9g01816 227 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 197 IPR045874 GO:0004672
Phco9g01816 227 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01816 227 Pfam Protein kinase domain 4 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01816 Phco-Chr9 42265451 42266669 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco9g01816 Pkinase 1.4e-23 CL0016