Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01787 ATGACTTGTTGCTTTCATCTTTTCAGAAAGAAAGGATCTTCCTCAAACACTCGATTGACCGGAGTTGATTTTGATGTTTCAGAAATCCAGAATGTCAATATCTACACTTACAGGGAACTGCAAAGTGCCACTGCAGATTTTAGTCCTGCAAACAGGATAGGGCACGGAGGTTTTGGAGAAGTCTATAAGGGAAAGCTGAGAAATGGTTCTCTGGTAGCTATAAAGGTTTTATCAGCTGATTCAAGACAAGGGGTCCGAGAGTTTTTGACAGAAATCAAGGTGATCTCTAGTATAGAGCACGAGAATCTGGTTAAGTTGCATGGATGTTGTGTGGAAGGCAAGCACAGGATTTTGGTATATGGTTATCTCGAGAATAACAGCCTAGCACAAACACTTATTGGTTCAGGCCACAGTAGCATCCAATTCAGTTGGTCTACAAGAAGGAACATTTGTGTAGGTGTTGCCCGGGGCCTTGCATTCCTTCATGAAGAGGTTCGACCACACATTATCCACAGAGACATAAAAGCAAGCAATGTACTACTTGACAAAGATCTCCAGCCAAAAATTTCAGATTTCGGGCTTGCAAAGCTTATTCCACCAAACCTGACCCATATCAGTACACGTGTTGCTGGAACAGTTGGTTATCTGGCACCTGAATATGCAATCCGAAATCAAGTGACCAGAAAATCAGATGTTTATAGCTTTGGGGTTTTATTATTAGAAATTGTTAGCGGAAGGCCTAACACAAATAGACGTTTACCTGATGAAGAACAGTATCTTCTCACAAGGGCTTGGGATTTGTATGAGGGTGGGGAGACAGAAAGATTGGTGGATGCTTTTTTAGATGGAGACTTCAATATTGAGGAGGCAACCAGATTTTGTAAAATTGCTCTCCTTTGCACTCAGGATTCTCCTCAGCTCCGGCCCTCTATGTCCACTGTGCTCGAAATGCTTTTAGGTGAAAAAGATTTGAATGAGGAGAATGTCACAAAACCAGGCATGATATTTGAATTTGTGGAAGCTAAAAGTGCAGGGAAACAAAAGGGCAAGTCTGAAGAGAATGGTAAATTTTTGTTGGCTGAAGGGAAGCAAGACGAGTCATCTTCTTCAGAAACCATGAGCTCTTTTGCTACCATGACCTTCACAGCAATATATGATAGAAGCAATTAA 1170 0.4154 MTCCFHLFRKKGSSSNTRLTGVDFDVSEIQNVNIYTYRELQSATADFSPANRIGHGGFGEVYKGKLRNGSLVAIKVLSADSRQGVREFLTEIKVISSIEHENLVKLHGCCVEGKHRILVYGYLENNSLAQTLIGSGHSSIQFSWSTRRNICVGVARGLAFLHEEVRPHIIHRDIKASNVLLDKDLQPKISDFGLAKLIPPNLTHISTRVAGTVGYLAPEYAIRNQVTRKSDVYSFGVLLLEIVSGRPNTNRRLPDEEQYLLTRAWDLYEGGETERLVDAFLDGDFNIEEATRFCKIALLCTQDSPQLRPSMSTVLEMLLGEKDLNEENVTKPGMIFEFVEAKSAGKQKGKSEENGKFLLAEGKQDESSSSETMSSFATMTFTAIYDRSN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01787 389 FunFam cold-responsive protein kinase 1 19 122 - -
Phco9g01787 389 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Phco9g01787 389 Gene3D Phosphorylase Kinase; domain 1 22 122 - -
Phco9g01787 389 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 330 - -
Phco9g01787 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Phco9g01787 389 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 365 - -
Phco9g01787 389 Gene3D Transferase(Phosphotransferase) domain 1 123 333 - -
Phco9g01787 389 ProSiteProfiles Protein kinase domain profile. 47 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01787 389 MobiDBLite consensus disorder prediction 347 372 - -
Phco9g01787 389 CDD STKc_IRAK 53 318 - -
Phco9g01787 389 SMART serkin_6 47 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01787 389 Pfam Protein kinase domain 50 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01787 389 SUPERFAMILY Protein kinase-like (PK-like) 26 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01787 Phco-Chr9 41872061 41874984 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01787 Pkinase 2.4e-47 CL0016