Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01751 ATGTTATATGTTTGGTTGTTCTTATTCTCATCCATGTCTACAACTTCCTCTTCATTAGAGAGTTTAGCAGTGAGTCAATCCATCCAAGATGGAAAGAATGAGACTTTGGTTTCAGCAGGTGGAATTACTGAACTGGGTTTCTTCAGTCCAGGAAATTCAGCCAGAAGATATTTGGGTATATGGTACATAAACGTATCCCCTTTCACTGTGATATGGGTGGCTAACCGAAATACACCTCTTGAGAATAACTCAGGAGTTCTCAAACTCAACCAAAAAGGGATTCTTGTGCTTCTCAATGGCACAAACAACATCATTTGGTCATCACCCAGCAGATCAAGTAATACAGTGAATGATCCAATAGCTCGTCTCTTGGATTCAGGAAATTTTGTAATGAGAAATGGAGGGGAAACAAACGAGGAGAGCGTCTTGTGGCAGAGTTTTGATTATCCGGGTGATACACACATGCCAGAAATGAACCTTGGATGGAACCTAGAGACTGGTGTGGAAAGATATATAGCATCTTGGAAAAGTGATGAGGATCCTGCAGAGGGAGAATATGTTCTAAAAGTGGATCGTAGAGGATATCCTCAAATAATGAAGTTCAAGGGGACTGAAATAAAATCGAGAGCAGGGTCATGGAATGGTTTGTCTCTTGTTGGAAATCCTATTCCAGCTCGTGGTACGTCAGCAAGATTTGTGTTTAATGAAAAAGAGGTCTATTTTTCGTACAGTCTTATTGATGATGGATTGGAGTTCTTTGTGTATACACTGACCCCTTCAGGCACAGGACAAAGTTGGTTTTGGACAACTGAAACAAGGACACGACAAGTGATCTCAAGTGGGGAGCAAGATCAATGCGAGAATTATGCCTTTTGTGGTGCAAATTCTGTATGCATTTATGATGGTAACTATCCAATTTGTGAATGCCTTAGAGGGTATGTTCCCAAGTCTCTTGATCAGTGGAATATATCAATTTGGCAGAATGGCTGTGTGCCAAGGGATAAATCTAACTGTACGAACAGATATACAGATGGCTTCTGGAAATACACTCACATGAAGTTGCCAGACACTTCTTCATCATGGTTTGATGCAACCATGAACCTTGATGAATGTAAGAAGTTGTGCATCAAAAACTGTTCTTGTACAGCATGTGCAAATTTAGATGTTCGTGATGAAGGAAGTGGTTGTCTTCTTTGGTTTAATAATCTGGTTGACATGAGGAATTTCTCCCAATGGGGACAAGACTTTTACATCAGACTCCCTGCTTCCGAATTAGATCATGCTGGCCATGGAAACATCACAATAAAGATAGTAGCAATTACAGTTGGTGTGATTATTTTCGGATTAGTCACATGTGCATACATATTTGTGAGAAAAAATCCAGGGATAGCTAGAAAAATTTATAGCAGACATTACAAAATTAAACAGAAAATAGAAGACTTTGAATTTCAAACTTTTGATTTTCCGGTCATTGCTAATGCTACTGAAAACTTTTCAACCAAGAACAAGCTTGGTGAAGGAGGCTTTGGACCAGTATACAAGGGCATACTGACAGATGGACAAGAGTTAGCAGTGAAAAGACTCTCAGAGAATTCCGGACAAGGGTTAGAAGAGTTCAAAAATGAAGTAGCATTGATTGCAAAACTTCAGCACCGTAACCTTGTAAAGCTCCTGGGTTGTTGCCTTGAAGGAGAAGAAAAAATGTTAATTTATGAATACATGGCAAACAAAAGCTTGGACTTCTTTGTTTTTGATGAAGCCAAAAGGAAGTTGCTAGATTGGCCCACGCGATTCAAGATTATCAGTGGCATTGCTCGAGGACTTTTGTATCTTCATCAAGATTCTAGACTAAGGATTATTCACAGAGATCTAAAAACTAGCAACATTTTACTAGACACAAATTTGGATCCCAAAATAGCAGACTTTGGCTTGGCTCGATCATTTTTGGGAGATCAAGTTGAGGGAAAGACACATAGGGTGGCTGGAACATATGGTTACATGCCTCCTGAGTATGCTGCACGTGGACATTTTTCAGTGAAATCAGATGTTTTTAGTTATGGTGTGATAGTACTAGAGATTGTAAGTGGGAAGAAAAACAGGGAATTTTCAGACCCAGAAAACAACAATAATCTTCTTGGTCATGCATGGAGATTATGGACTGAAGAACGGGGACTTGAACTGCTAGATGAATTGATAGGACAACAATGCCTACCATCTGAAGTCACTAGATGCATACAGGTAGGTCTATTGTGTGTGCAGCAAAGATCAAAAGATAGACCAGACATGTCATCAGTGGTTCTAATGTTGAATGGTGAAAAATTATTACCAAAGCCAAAGGTTCCTGGCTTTTACATTGAATCAGATGTTAAAATTGAAACAAATTCTTCGTCCGAAGATCACACACTATTCTCAGTTAATGAACTTTCCATCACAATGATAGATGCAAGATAG 2451 0.3921 MLYVWLFLFSSMSTTSSSLESLAVSQSIQDGKNETLVSAGGITELGFFSPGNSARRYLGIWYINVSPFTVIWVANRNTPLENNSGVLKLNQKGILVLLNGTNNIIWSSPSRSSNTVNDPIARLLDSGNFVMRNGGETNEESVLWQSFDYPGDTHMPEMNLGWNLETGVERYIASWKSDEDPAEGEYVLKVDRRGYPQIMKFKGTEIKSRAGSWNGLSLVGNPIPARGTSARFVFNEKEVYFSYSLIDDGLEFFVYTLTPSGTGQSWFWTTETRTRQVISSGEQDQCENYAFCGANSVCIYDGNYPICECLRGYVPKSLDQWNISIWQNGCVPRDKSNCTNRYTDGFWKYTHMKLPDTSSSWFDATMNLDECKKLCIKNCSCTACANLDVRDEGSGCLLWFNNLVDMRNFSQWGQDFYIRLPASELDHAGHGNITIKIVAITVGVIIFGLVTCAYIFVRKNPGIARKIYSRHYKIKQKIEDFEFQTFDFPVIANATENFSTKNKLGEGGFGPVYKGILTDGQELAVKRLSENSGQGLEEFKNEVALIAKLQHRNLVKLLGCCLEGEEKMLIYEYMANKSLDFFVFDEAKRKLLDWPTRFKIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDTNLDPKIADFGLARSFLGDQVEGKTHRVAGTYGYMPPEYAARGHFSVKSDVFSYGVIVLEIVSGKKNREFSDPENNNNLLGHAWRLWTEERGLELLDELIGQQCLPSEVTRCIQVGLLCVQQRSKDRPDMSSVVLMLNGEKLLPKPKVPGFYIESDVKIETNSSSEDHTLFSVNELSITMIDAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01751 816 SMART ntp_6 341 420 IPR003609 -
Phco9g01751 816 Pfam PAN-like domain 340 406 IPR003609 -
Phco9g01751 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 759 - -
Phco9g01751 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Phco9g01751 816 Gene3D - 14 147 IPR036426 -
Phco9g01751 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Phco9g01751 816 SUPERFAMILY Protein kinase-like (PK-like) 481 769 IPR011009 -
Phco9g01751 816 Gene3D Phosphorylase Kinase; domain 1 471 573 - -
Phco9g01751 816 Pfam Domain of unknown function (DUF3403) 775 816 IPR021820 GO:0004674
Phco9g01751 816 Pfam D-mannose binding lectin 69 176 IPR001480 -
Phco9g01751 816 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Phco9g01751 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 181 IPR036426 -
Phco9g01751 816 ProSiteProfiles Bulb-type lectin domain profile. 21 144 IPR001480 -
Phco9g01751 816 Gene3D Transferase(Phosphotransferase) domain 1 574 776 - -
Phco9g01751 816 SMART blect_4 27 150 IPR001480 -
Phco9g01751 816 SMART serkin_6 498 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01751 816 FunFam - 574 778 - -
Phco9g01751 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 14 147 - -
Phco9g01751 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 463 573 - -
Phco9g01751 816 Pfam Protein tyrosine and serine/threonine kinase 500 766 IPR001245 GO:0004672|GO:0006468
Phco9g01751 816 Gene3D Hepatocyte Growth Factor 337 418 - -
Phco9g01751 816 ProSiteProfiles Protein kinase domain profile. 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01751 816 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Phco9g01751 816 CDD STKc_IRAK 504 771 - -
Phco9g01751 816 CDD PAN_AP_plant 335 421 - -
Phco9g01751 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 337 420 - -
Phco9g01751 816 CDD B_lectin 31 150 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01751 Phco-Chr9 41377372 41380403 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01751 PK_Tyr_Ser-Thr 1.6e-46 CL0016