Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01715 ATGGATATTCTTTCTTCATTGATCTTTGTTGCTTGTCTACTCATCCCTTCTCTCAAATTTTTCATAGCAGCTGATACTATTCGTTTGTCCCAGTCCATTAGTGATGGCATGACCTTGGTTTCCCAAGGTGAAACATTTGAACTCGGTTTCTTCAGTCCTGAGAACTCAAAGAATCGTTATCTTGGAATTTGGTACAAGAATATTACACAGACAGTTGTTTGGGTCGCAAATGGAGCCATCAATGACTCCTCAGGGATCTTAACAGTGAACAGCACAGGAAGCCTTGTTCTCAAGCAGCATGACAAGGTTGTGTGGTACACAACAACGTCTGAAAAACAAGCACGGAATCCTGTGGCACAGCTTTTGGATTCAGGGAACCTTGTGGTAAGAGATGAGAGTGAAACAGACTCAGAAGAAGCCTATCTGTGGCAAAGCTTTGACTACCCTTCAGATACAATATTGCCAGGGATGAAGCTGGGACGGAACCTCAGAACTGGTATGGAATGGAGAATGACAGCTTGGAAGAGTTCCAGTGATCCATCCCCAGGAATCTTTTATTGGGGTCTATTGCTTTATAATTATCCTGAGTTTTATCTGATGAAGGGAACAGAAAAGTTTGTGAGAATTGGACCATGGAATGGCCTACATTTCAGTGGTATACCAGATCAAAAGCCTAACTCCATTTATGATTTCAACTACATATCCAACAAGGATGAGATGTACTACACTTTCAGCCTCAAGAATGATGCTGTGATCTCAAGATTGGTAATGAATCAAACCAGTTATATGAGTATTCGGTACGTATGGATGGAAGATGGACAATATTGGAAGTTATATAAATCACTGCCAAAAGACAATTGTGACTATTATGGAATATGTGGAGTCTATGGGACATGCACCATCACAGGTTCTCAAATATGTCAATGCTTATCAGGGTTCAGTCCCAAGTCACCACAAGCATGGAACTCATCTGACTGGTCTGATGGATGTGTACGGAATAAGCCATTAAACTGCACTGAGAAACACAAGGATGGCTTTGTGAAAGTGAAAGGTGTGAAAGTGCCAGATACTACAAATACTTCGGTAGATGAGACAATAAGTCTAGAAGAATGCAGAGAGAAGTGCTCAAATAATTGTTCTTGTATGGCCTATACTAATTCAGACATAAATGGTGAAGGTACTGGTTGTGTCATGTGGTTTGGAGATCTAATTGATATTAGACAGTTTGATACTGATGGGCAGGATCTACATATTCGAATGCATGCTTCAGAAATAGGGAAACAAGAAGGGAACAAGAAAGTGATAATAATAGTTGCTTCCACCATTGTCATCATTTTAGGAATCATTTTCATTGTTTGCTATCGATTCTACACTGTCCGGCGCAGCATAACTGAGTATTCAGACACTGTACATGATCAAAATAGAGAAGGTAGTGAAGATGATCTTGATCTCCCATCACTTGACCTTTCAACAATAGTCACCGCTACCAATAACTTCTCAATAAAAAACAAGATTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGAAAAACGGTAAGTGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGCTCTGGACAAGGAATGACAGAGTTCAAGAATGAAGTAAAACTGATAGCAAAACTTCAGCACCGAAATCTTGTTAAGCTTCTCGGTTGTTGCGTTCAGGAACAGGACAGAATGCTAGTCTATGAATACATGACTAACCGTAGTTTGGATTGGTTGATATTTGATGATACTAAAAGCAAACTGCTAGATTGGCCTAAGCGCTTCAACATTATCTGTGGAATTGCCCGAGGTCTTCTTTATCTTCATCACGATTCTAGACTAAGGATAATTCATAGAGATCTCAAAGCAAGTAATGTTTTGCTGGATGACCAGATGAATCCAAAAATATCAGATTTTGGTATTGCTAGAATTTTTGGAGGAGATCAGACAGAAGGAAACACAAAGCGAGTAGCAGGAACTTATGGCTACATGTCACCAGAATATGCAGCAGATGGTCTTTTTTCTATGAAATCTGATGTTTTCAGTTTTGGAATTTTGCTGCTGGAGATTATAAGTGGAAAAAGAAATAGAGGTTTCTATCTTGAAAACCAATATCCTAACCTTGTAACTCATGCATGGAGTCTATGGCAAGAGGGTAGGGCTATAGAGATGTTTGACTCAAGCATTGAAGACTCATGTGTTTTATCAGAGGTTTTGCGTTGCATCCATGTGAGTCTCTTATGTGTCCAACAATATGCAGAGGATAGGCCTGTAATGTCTGCTGTGGTTCTAATGCTGGGGAGTGAGAGTGAATTGGCTGAGCCAAAAGAACCTGGTTTCTATATAAAGAATGATCAAGTTGCAACAACTTCTACCACAGGTCGAACTGTCTCAACCAATGAAATAACTATCACATTGTTAGAAGCTAGATGA 2445 0.398 MDILSSLIFVACLLIPSLKFFIAADTIRLSQSISDGMTLVSQGETFELGFFSPENSKNRYLGIWYKNITQTVVWVANGAINDSSGILTVNSTGSLVLKQHDKVVWYTTTSEKQARNPVAQLLDSGNLVVRDESETDSEEAYLWQSFDYPSDTILPGMKLGRNLRTGMEWRMTAWKSSSDPSPGIFYWGLLLYNYPEFYLMKGTEKFVRIGPWNGLHFSGIPDQKPNSIYDFNYISNKDEMYYTFSLKNDAVISRLVMNQTSYMSIRYVWMEDGQYWKLYKSLPKDNCDYYGICGVYGTCTITGSQICQCLSGFSPKSPQAWNSSDWSDGCVRNKPLNCTEKHKDGFVKVKGVKVPDTTNTSVDETISLEECREKCSNNCSCMAYTNSDINGEGTGCVMWFGDLIDIRQFDTDGQDLHIRMHASEIGKQEGNKKVIIIVASTIVIILGIIFIVCYRFYTVRRSITEYSDTVHDQNREGSEDDLDLPSLDLSTIVTATNNFSIKNKIGEGGFGPVYKGKTVSGQEIAVKRLSRSSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCVQEQDRMLVYEYMTNRSLDWLIFDDTKSKLLDWPKRFNIICGIARGLLYLHHDSRLRIIHRDLKASNVLLDDQMNPKISDFGIARIFGGDQTEGNTKRVAGTYGYMSPEYAADGLFSMKSDVFSFGILLLEIISGKRNRGFYLENQYPNLVTHAWSLWQEGRAIEMFDSSIEDSCVLSEVLRCIHVSLLCVQQYAEDRPVMSAVVLMLGSESELAEPKEPGFYIKNDQVATTSTTGRTVSTNEITITLLEAR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01715 814 SMART blect_4 30 149 IPR001480 -
Phco9g01715 814 CDD PAN_AP_plant 335 419 - -
Phco9g01715 814 Gene3D Transferase(Phosphotransferase) domain 1 575 785 - -
Phco9g01715 814 ProSiteProfiles Bulb-type lectin domain profile. 24 142 IPR001480 -
Phco9g01715 814 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Phco9g01715 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 146 - -
Phco9g01715 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Phco9g01715 814 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01715 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Phco9g01715 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 180 IPR036426 -
Phco9g01715 814 CDD STKc_IRAK 505 770 - -
Phco9g01715 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 463 574 - -
Phco9g01715 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Phco9g01715 814 Gene3D - 20 146 IPR036426 -
Phco9g01715 814 SUPERFAMILY Protein kinase-like (PK-like) 485 770 IPR011009 -
Phco9g01715 814 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Phco9g01715 814 SMART serkin_6 499 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01715 814 CDD B_lectin 30 149 IPR001480 -
Phco9g01715 814 Pfam PAN-like domain 338 406 IPR003609 -
Phco9g01715 814 Pfam Protein tyrosine and serine/threonine kinase 500 767 IPR001245 GO:0004672|GO:0006468
Phco9g01715 814 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 761 - -
Phco9g01715 814 ProSiteProfiles PAN/Apple domain profile. 338 422 IPR003609 -
Phco9g01715 814 Gene3D Phosphorylase Kinase; domain 1 462 574 - -
Phco9g01715 814 Gene3D Hepatocyte Growth Factor 337 422 - -
Phco9g01715 814 Pfam D-mannose binding lectin 71 175 IPR001480 -
Phco9g01715 814 SMART ntp_6 341 420 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01715 Phco-Chr9 40445935 40449536 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01715 PK_Tyr_Ser-Thr 3.2e-46 CL0016