Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01713 ATGACCTCTTTCACTTTTCTCTTTCTTTTCTCTTATCTACTCAATTTGTTGCCTATAATTTCATCTGCAACTGACACCATTAATGCGTCACAGCCCCTTCTTGATGGCAGTACCTTGGTGTCTAAAGATGGAACTTTTGAAATGGGTTTCTTTAGTCCAAAAAATAGTACTGAGACTACCACAAATCGGTACCTTGGAATATGGTACAGAAGTATCCCAGTTAGAACCGTCGTTTGGGTTGCCAACCGTGAAAACCCAGTTAAGGATAGTTCCGGCAAGTTCAGCATAAACACAGACGGAAAACTGGTTATCCTCAGCAGTAACAATACTCTTGTTTGGTCAGCAAACTCAACTGATGAAACGAAAGCACAGAGTCCAATTGTTCAGCTGTTAGACTCAGGGAACTTGGTACTAAGAGATGAGAAGGATTCGAACCCACAGATATACTTGTGGCAAAGCTTTGACTACCCTTGTGATACTTTCCTGCCAGGAATGAAGATCGGATGGAACCTTAAGACGGGTCTTAACCGGCGTTTAACCGCATGGAAGAACTGGGATGACCCTTCTCCAGGCGACTTCATTTGGGGTATGGTGCTAGGTAACACTACTGAATTGGTTATGTGGAAAGGTTCTAGTGAGTATTATAGGAGTGGCCCTTGGAATGGTGTTAGATTCAATGGAAAAACCACACCCCTTTTTAACTTAGAGTTATATTCCACTGTTGATGAAGTGTATTACACATACAACATTGGGAATAAGTCCTTGATTACAAGAGTTGTTTTGAACCAATCTGTTTATTCTCGCCAGCGCTATAATTTGAATGTAGAGAACCAAACTTGGAAGCTCTATTCATCAGTTCCAAGAGACATTTGTGACACCTACGATCTTTGTGGTCCCTATGGAAACTGTATTGTGAATGAATCACCACCGTGCCAGTGTTTAACCGGGTTCAAGCCAAAATCAGTTCAAAATTATGAGGCATTGGATTGGAGCCAAGGATGTGTTCTTAGTGAAGCGTGGAGTTGTGGAGTAAAAAGTAAAGATGGGTTTAAAAAATTCAGTGGGTTGAAAATGCCAGATACTACAAGTTCTTGGGTTGATCAAAATTTGACACTTGAGAATTGCAAGGAAAAATGCTTGCTAAATTGTTCTTGCACTGCATATGCAAATTTAGATGTCAGGGGAGATGGTAAAGGCTGTATCATTTGGCATGGAGCTTTGCTTGATTTAAGGGTGGCTTCAGTTCCCGGGCAAGACCTATATATTCGAATGGTTGCTTCAGAAAATGGATGGGATAAGAAAATTGTAGCAGTGGTGATTCCTGTGACTCTCCTTGCTTTTGTCATTGTTTTCATTTTCACCTATGTTTACCGGCGGAAAAGAAAGCTTAGAGAGAAAACCTCAGAAGAAAATAAAGACGAAGGATGTGAAGAAGACTTGGAGCTTTCTTCCTTTGATTTTTCTACTATAGTTCGTGCCACAAATAACTTCTCAAGTGACAAGAGGCTTGGGCAAGGTGGTTTTGGACCTGTGTATCGGGGTACACTAGAAGATGGACAAGAGATTGCTGCCAAGAAGCTTTCTAATAGTACTGGACAAGGAGTGAAAGAATTCAAGAACGAAGTTCTATTGTGTGCCAAACTTCAGCACCGAAATCTTGTTAAGGTTCTCGGTTTTTCCACTCAAGGAGGGGAAAAAGTGCTGGTCTATGAATACATGCCAAATAAAAGCCTGGATTCCTTTCTTTTTGATGCTTCCAAAAGTGGACTCTTGAACTGGTCTAAGCGATTTAACATAATATTTGGAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCCAGGTTGAGAATAATTCACAGAGACATGAAAACAAGCAATATTCTACTAGATAGCGAGTTAAATCCAAAAATTTCAGATTTTGGTGTTGCCCGAATGTTTAGTGCAAATCAAACAGAAGAGAATACAAAAATGGTGGTTGGAACTTATGGATACATGGCACCAGAATACGCAATTGATGGGTTGTTCTCTGTCAAATCTGATGTATACAGCTTTGGGGTACTATTACTTGAGATAGTAAGTGGAAAGAAAAACAGAGGAATTTTCTTTCCAGATCACGGACTTAATCTATTAGGACATGCTTGGAGATTGTGGAAAGAAAGCTCTCCAATGAAATTAGTTGATGCTGCTTTGGGCGATACCTTTACTGTCTCTGAAGTACTACGCTGCATACATGTGGGTCTTTTATGTGTTCAACTATATCCAGAGGATAGGCCAAACATGGCATCAGTGATTTTTATGTTGAGCAGTGAAAATACTTTGCCAACACCTAAGGAACCTGGTTTCCTTATTGAAAGGACGAAGATTGCAGGTGAATGTTCAACTAGCAATGAAATGAAGACTTCCACTAATGAATTAACTATAACCCTTCTAGAGGCTAGGTAG 2445 0.4008 MTSFTFLFLFSYLLNLLPIISSATDTINASQPLLDGSTLVSKDGTFEMGFFSPKNSTETTTNRYLGIWYRSIPVRTVVWVANRENPVKDSSGKFSINTDGKLVILSSNNTLVWSANSTDETKAQSPIVQLLDSGNLVLRDEKDSNPQIYLWQSFDYPCDTFLPGMKIGWNLKTGLNRRLTAWKNWDDPSPGDFIWGMVLGNTTELVMWKGSSEYYRSGPWNGVRFNGKTTPLFNLELYSTVDEVYYTYNIGNKSLITRVVLNQSVYSRQRYNLNVENQTWKLYSSVPRDICDTYDLCGPYGNCIVNESPPCQCLTGFKPKSVQNYEALDWSQGCVLSEAWSCGVKSKDGFKKFSGLKMPDTTSSWVDQNLTLENCKEKCLLNCSCTAYANLDVRGDGKGCIIWHGALLDLRVASVPGQDLYIRMVASENGWDKKIVAVVIPVTLLAFVIVFIFTYVYRRKRKLREKTSEENKDEGCEEDLELSSFDFSTIVRATNNFSSDKRLGQGGFGPVYRGTLEDGQEIAAKKLSNSTGQGVKEFKNEVLLCAKLQHRNLVKVLGFSTQGGEKVLVYEYMPNKSLDSFLFDASKSGLLNWSKRFNIIFGIARGLLYLHQDSRLRIIHRDMKTSNILLDSELNPKISDFGVARMFSANQTEENTKMVVGTYGYMAPEYAIDGLFSVKSDVYSFGVLLLEIVSGKKNRGIFFPDHGLNLLGHAWRLWKESSPMKLVDAALGDTFTVSEVLRCIHVGLLCVQLYPEDRPNMASVIFMLSSENTLPTPKEPGFLIERTKIAGECSTSNEMKTSTNELTITLLEAR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01713 814 Pfam S-locus glycoprotein domain 215 321 IPR000858 GO:0048544
Phco9g01713 814 CDD PAN_AP_plant 341 423 - -
Phco9g01713 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 188 IPR036426 -
Phco9g01713 814 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Phco9g01713 814 Gene3D - 18 154 IPR036426 -
Phco9g01713 814 SMART serkin_6 497 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01713 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 460 572 - -
Phco9g01713 814 SMART ntp_6 345 424 IPR003609 -
Phco9g01713 814 SUPERFAMILY Protein kinase-like (PK-like) 481 776 IPR011009 -
Phco9g01713 814 SMART blect_4 30 157 IPR001480 -
Phco9g01713 814 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 759 - -
Phco9g01713 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Phco9g01713 814 Pfam D-mannose binding lectin 76 183 IPR001480 -
Phco9g01713 814 Gene3D Transferase(Phosphotransferase) domain 1 573 777 - -
Phco9g01713 814 Pfam PAN-like domain 342 410 IPR003609 -
Phco9g01713 814 ProSiteProfiles Protein kinase domain profile. 497 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01713 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 154 - -
Phco9g01713 814 CDD B_lectin 30 157 IPR001480 -
Phco9g01713 814 Gene3D Phosphorylase Kinase; domain 1 457 572 - -
Phco9g01713 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 776 - -
Phco9g01713 814 ProSiteProfiles Bulb-type lectin domain profile. 24 151 IPR001480 -
Phco9g01713 814 Pfam Domain of unknown function (DUF3403) 769 814 IPR021820 GO:0004674
Phco9g01713 814 Pfam Protein tyrosine and serine/threonine kinase 500 698 IPR001245 GO:0004672|GO:0006468
Phco9g01713 814 Gene3D Hepatocyte Growth Factor 341 418 - -
Phco9g01713 814 CDD STKc_IRAK 503 768 - -
Phco9g01713 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01713 Phco-Chr9 40365440 40368561 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01713 PK_Tyr_Ser-Thr 3.5e-44 CL0016