Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01712 ATGGTCTGTTACACTTTTCTGTTTCTTTTTGCCGAACTAATCATGCTCTTCCCTTCAATTTCGTCTGCAACTGATACCTTCAACGGGTCGCACTCCCTTCCTGATGGCACAACCTTGGTGTCTAAAGATGGAACTTTTGAAATGGGTTTCTTCAGTCCAAGCAACAATAACCCAACCACAAATCGCTACCTTGGAATATGGTACAAAAGTATCCCAGTTAGAACCGTTGTTTGGGTTGCCAACCGTCAAAACCCAGTTAAGGATAACTCCAGCAAGTTGAGCATAAGCACACAAGGAAAACTTGTGATCCTCAGCAAGAACAACACTCTTGTTTGGTCAGCAAACACGACAGAAGAAACAAAAGCACAGAGTCTAATTGTGCAGCTTTTGGACTCAGGGAACTTGGTAGTAAGAGATGAGAAAGATTCAAATCCACTGAACTTCTTGTGGGAAAGCTTTGACTATCCTTGTGATACTTTTCTTCCAGGAATGAAGATTGGATGGAATCTTAAGAAGGGTCTTAGCTGGAGATTAACCGCGTGGAAGAACTGGGATGACCCTTCTCCAGGGAACTTCAGTTGGGGTATGGCGCTTGGTAACACTCATGAACTGGTTATGTGGAAAGGTTCTGATGAGTATTATAGAAGTGGCCCTTGGAATGGTGTCAGATTCAGTGGCAAAAACACTCCCCGTTACAACTTAGATTTTAACTCCACTCTAGATGAAGTGTATTATACATACAGGTTTGTCAGCAATTCATTTATTACAAGGGTTGTTTTGAACCAATCCCTTTATTCTCGACGACGCTATAATTGGATTAAGGAGAACCAAACTTGGAGTCTTTATTCAAAGGTTCCTAGAGACAAATGTGACAACTACAATGCTTGTGGTCCCTATGGGAATTGTAATGGGGACGAACCATTGCAGTGCGAGTGTTTAATGGGATTCAAACCAAAATCAGTTCAAAATTATGAGGCATTGGATTCGAGTCAAGCATGTGTGATTAGTGAACCGTGGAGCTGTGGAGCAAAAGACAAAGGTTTTAAAAAATTTAGTGGGTTGAAATTGCCAGATACTACAAGGTCTTGGATTGATCCAAATTTGACACTTGAGAATTGCAAGGCTAAATGCTTGCAAAATTGTTCTTGCACTGCATATGCAAGCTTAGATATCAGAGATGGTAGTGGTTGTATCATTTGGACTGAAGCTTTGGTTGATTTAAGGGTGGCTTCAGTCCCGGGGCTAGATCTATATATTCGAATTATTACTGCGGAAACAGAAGAAAAGAGAGGCTATAAGAAATTGGTAGCAGTGCTGATTCCAGTTATTCTCCTAACTATTGTGATTGTTTTCATATTCACATATAGTTATTGGCGGAAAAGAAAGCTTAGAGAGAAAACCTCAGAAGAAAATAAAAATGAAGACTGTGAAGCAGAGTTAGAGCTTCCTTTCTTTGATTTTGCTACAATAGTTCGTGCCACCAGCAATTTCTCAAGTGACAAGATGCTAGGCCAAGGTGGTTTTGGACCTGTGTATAGGGGAACACTCGCAAATGGACAAGAGATTGCTGCCAAGAGGCTTTGTAGTAATACTGGACAAGGAATGAAAGAATTAAAAAATGAAGTGATATTGTGTGCCAAACTTCAGCATCGGAATCTTGTAAAGCTTCTTGGTTGTTCCATCCAAGGAGAGGAAAAAGTTTTGGTCTATGAACACATGCCTAATAAAAGCTTAGACTCCTTTCTCTTTGGAAGCTTGGCAGATTCTTCCAAAAGAGGACTCCTAAATTGGTCAAAGAGGTTGAACATTATACATGGCATTGCTCGGGGATTACTATATCTTCATCAAGATTCTAGATTAAGAATCATTCATAGAGATATGAAAGCGAGTAATATCCTCTTGGACAATGAGTTGAATCCAAAAATTTCAGATTTTGGTATAGCACGAATGTTTAGTGGAAATCAAACAGAAGGGAATACAAAACAAGTTGTTGGAACATATGGATACATGGCACCAGAATATGCTATTAATGGACTGTTCTCTACCAAATCTGATGTATACAGCTTTGGAGTACTACTACTAGAGATAGTAAGTGGGAAGAAAAATGGAGGAATTTTGTATCCCGATCACGGACTTAATTTATTAGGACATGCTTGGAGATTGTGGAAAGAGGACACTCCTATGAAATTAGTTGATACTTCTTTGGGTGACACCTTTACCATATCAGAAGCATTACGGTGCATTCATGTTGGTCTTCTATGTGTGCAACTACATCCGGATGATAGGCCAAACATGGCATCAGTGATTTTTTTGTTGAGCAGTGAAAATATTTTGCCACAACCAAAGGAACCAGGTTTTCTTATTGAAAGGATGAAAACTGGTGGCGAATGTTCAGCTAGCAATGCAATTAAGATTTCCACTACTGAATTAACTATAACCCAGCTGCAGGCTAGGTAG 2457 0.3972 MVCYTFLFLFAELIMLFPSISSATDTFNGSHSLPDGTTLVSKDGTFEMGFFSPSNNNPTTNRYLGIWYKSIPVRTVVWVANRQNPVKDNSSKLSISTQGKLVILSKNNTLVWSANTTEETKAQSLIVQLLDSGNLVVRDEKDSNPLNFLWESFDYPCDTFLPGMKIGWNLKKGLSWRLTAWKNWDDPSPGNFSWGMALGNTHELVMWKGSDEYYRSGPWNGVRFSGKNTPRYNLDFNSTLDEVYYTYRFVSNSFITRVVLNQSLYSRRRYNWIKENQTWSLYSKVPRDKCDNYNACGPYGNCNGDEPLQCECLMGFKPKSVQNYEALDSSQACVISEPWSCGAKDKGFKKFSGLKLPDTTRSWIDPNLTLENCKAKCLQNCSCTAYASLDIRDGSGCIIWTEALVDLRVASVPGLDLYIRIITAETEEKRGYKKLVAVLIPVILLTIVIVFIFTYSYWRKRKLREKTSEENKNEDCEAELELPFFDFATIVRATSNFSSDKMLGQGGFGPVYRGTLANGQEIAAKRLCSNTGQGMKELKNEVILCAKLQHRNLVKLLGCSIQGEEKVLVYEHMPNKSLDSFLFGSLADSSKRGLLNWSKRLNIIHGIARGLLYLHQDSRLRIIHRDMKASNILLDNELNPKISDFGIARMFSGNQTEGNTKQVVGTYGYMAPEYAINGLFSTKSDVYSFGVLLLEIVSGKKNGGILYPDHGLNLLGHAWRLWKEDTPMKLVDTSLGDTFTISEALRCIHVGLLCVQLHPDDRPNMASVIFLLSSENILPQPKEPGFLIERMKTGGECSASNAIKISTTELTITQLQAR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01712 818 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Phco9g01712 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 780 - -
Phco9g01712 818 Gene3D Transferase(Phosphotransferase) domain 1 573 779 - -
Phco9g01712 818 Gene3D Phosphorylase Kinase; domain 1 457 572 - -
Phco9g01712 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 153 - -
Phco9g01712 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Phco9g01712 818 Pfam D-mannose binding lectin 75 182 IPR001480 -
Phco9g01712 818 Pfam S-locus glycoprotein domain 214 320 IPR000858 GO:0048544
Phco9g01712 818 SMART serkin_6 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01712 818 CDD PAN_AP_plant 340 421 - -
Phco9g01712 818 CDD B_lectin 30 156 IPR001480 -
Phco9g01712 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 763 - -
Phco9g01712 818 CDD STKc_IRAK 503 769 - -
Phco9g01712 818 Pfam PAN-like domain 341 407 IPR003609 -
Phco9g01712 818 Gene3D Hepatocyte Growth Factor 341 416 - -
Phco9g01712 818 SMART ntp_6 343 421 IPR003609 -
Phco9g01712 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 460 572 - -
Phco9g01712 818 Coils Coil 459 479 - -
Phco9g01712 818 Gene3D - 19 153 IPR036426 -
Phco9g01712 818 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Phco9g01712 818 ProSiteProfiles Protein kinase domain profile. 497 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01712 818 SUPERFAMILY Protein kinase-like (PK-like) 481 776 IPR011009 -
Phco9g01712 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 187 IPR036426 -
Phco9g01712 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Phco9g01712 818 SMART blect_4 30 156 IPR001480 -
Phco9g01712 818 Pfam Protein tyrosine and serine/threonine kinase 500 702 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01712 Phco-Chr9 40353582 40356748 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01712 PK_Tyr_Ser-Thr 9.8e-43 CL0016