Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01710 ATGACGATTTTCACTCTCACACTTGGTATTTGCAACCTACTTTTTCTCCTTTCAAAAGCTTTCTCAACTGATACGCTTACCTTCTCACAATCTCTCCATGATGGTACCACCTTATCGTCCAAAGATGAAACTTTCGAACTGGGTTTCTTCTCCCTAAGAAACTCCACAAACCGTTACCTAGGAATCTGGTTCAAAAACATCCCAGTAAAAACCATTGTTTGGGTTGCGAACCGTGACCACCCTCTCAAAGACAACTCCACCAAGTTGACCATAACCAACGACGGAAACCTCCTCCTTCACTCCAACAACAACACAGTTCACTGGTCAACAAACACGACAACAAAGCCTTTGAGACCACCCATTTTGCAACTCTTAAACACCGGAAACTTAATACTCCGCAACGATGATGACCACGGCAATAATGAAGAGAAGTTCTTGTGGCAAAGCTTTGACTACCCTTGTGACACATTGCTACCAGGAATGAAGCTTGGATGGAACAAGAAAACCGGTCTCAATCGAATTATTACTGCGTGGAAGAACTGGGATGACCCTTCTGCTGGAAACTTCACATGGGGCATCACATTTGACAGCAACCCTGAAATGGTTCTTTGGAAGGGAACATCTAAGTACCATAGGAGTGGCCCTTGGAATGGTGTCCGATTCAGTGGTGCATTTGGTGGTTCAAATAGGTTAACCACTCACCCTCTTTTCGTTTACAAATTGGTCAACAACAACAACGATGAAGTGTACTACTCATACAGATCAATCAACAAGTCCCTGATCTCAATAGTTGTCATGAACCAAACCCTTTTCCGCCGCCAACGGATCATTTGGATCCCCGACAACGGAACTTGGAGGTTGTTCCAAACCGCTCCAAGAGATATCTGTGACACTTACAATCCATGTGGTTCTTATGCGAATTGCATGGTTGATGCATCACCTGTGTGCCAGTGTTTAGAAGGATTTCAACCGAAGTCTTCAGAGACTATGGACTTGTCACAAGGGTGTGTGAGAAGTGAACCGTGGAGGTGCAGGGTAGATGGGAGAGATGGATTTAGAAAATTTGTTGGGTTGAAGTATCCTGATACGACACATTCATGGGTTAATAGAAGCATGACACTCGATGAATGCAAGGTAAAGTGTTGGGAAAATTGTTCGTGCACGGCTTATGCAAACTTGGATATAAGAGGAGCAGGAAGTGGGTGTTCTATTTGGTTCGGTGATCTTATTGATTTGAAAGTTGTTTCACAAAGTGGGCAATATCTGTATATTCGAATGGCAGATTCACGGACAGATCCTAAAGATGCCCACAAGAAGAAGGCATTGTTGCTGATAGGTACCACCGTGGCTCCTACTGTTCTTGTGATTCTATTTGCAATCCTATACTATTACAGGAGAAAAAGGAAGTATGAAGAAGAAAACGTGTCAGTAGTAAAGAATGATAAAGTTGTTGGACAAGAAGATAGTATGGAACTACCGTTGTTTGATTTTGCTACAATAGTTAATGCTACCAACAACTTCTCAACTGACAACAAACTTGGGCAAGGTGGGTTTGGGCCTGTATACAAGGGTGTATTAGCAGACGGACAAGAAATTGCTGTTAAAAGGTTATCTAGGAGTTCAGGACAAGGATTAACAGAATTTAAGAATGAAATTATATTGTGTGCCAAACTGCAACACCGAAATCTAGTTAAAGTTCTTGGTTGCTGCATAGAAGAAGAGGAGAAAATGCTTCTCTATGAATATATGCCTAACAGAAGTTTAGATTCATTTCTTTTCGATTCAACTAAAAGTGAGATTTTGGACTGGTCTAAGCGCTTTCATATCTTATGTGCAACTGCTGGTGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGAATTATACATAGAGATTTAAAAGCAAGTAATATTTTATTGGACAACAACTTAAATCCTAAAATTTCAGATTTTGGTTTGGCAAGAATGTGTGGAGGTGATCAAATTGAAGGAAATACTAACAGGATTGTAGGAACATATGGATACATGGCACCTGAATATGTTATCCATGGATTATTCTCCACAAAATCTGATGTATTTAGTTTTGGCATATTATTGCTGGAAATCGTTAGTGGAAAAAAGAACAGAGAAGTTACCTATCCACACCACAGTCATAATCTTATTGGGCATACATGGAAGTTGTGGAAAGAAGGCACACCAGAAAAATTGATTGATAATTGTTTGGAGGATGCAAGTATCTTATCAGAAGCAGTACGTTCCATTCACATCGGTCTTCTATGCCTTCAACGTCAACCTAATGATCGACCAAACATGTCCTCTGTGGTTGTTATGTTAAGTAGTGATAATGAATTACCAGAACCAAAGGAACCTGGTTTTTTGATAGATAGGATCTTGAATGAAGAGCAATCAGAATTTAGAAGCCAAACTTCTTCAACCAATGAAGTAACCATTTCAATCCTGAATGTATGGCTTGGAGTTTACGGTTTTTCAGATTTTCTGGGGTTGTCTAAAGGATCAAGATTCTAA 2526 0.4006 MTIFTLTLGICNLLFLLSKAFSTDTLTFSQSLHDGTTLSSKDETFELGFFSLRNSTNRYLGIWFKNIPVKTIVWVANRDHPLKDNSTKLTITNDGNLLLHSNNNTVHWSTNTTTKPLRPPILQLLNTGNLILRNDDDHGNNEEKFLWQSFDYPCDTLLPGMKLGWNKKTGLNRIITAWKNWDDPSAGNFTWGITFDSNPEMVLWKGTSKYHRSGPWNGVRFSGAFGGSNRLTTHPLFVYKLVNNNNDEVYYSYRSINKSLISIVVMNQTLFRRQRIIWIPDNGTWRLFQTAPRDICDTYNPCGSYANCMVDASPVCQCLEGFQPKSSETMDLSQGCVRSEPWRCRVDGRDGFRKFVGLKYPDTTHSWVNRSMTLDECKVKCWENCSCTAYANLDIRGAGSGCSIWFGDLIDLKVVSQSGQYLYIRMADSRTDPKDAHKKKALLLIGTTVAPTVLVILFAILYYYRRKRKYEEENVSVVKNDKVVGQEDSMELPLFDFATIVNATNNFSTDNKLGQGGFGPVYKGVLADGQEIAVKRLSRSSGQGLTEFKNEIILCAKLQHRNLVKVLGCCIEEEEKMLLYEYMPNRSLDSFLFDSTKSEILDWSKRFHILCATAGGLLYLHQDSRLRIIHRDLKASNILLDNNLNPKISDFGLARMCGGDQIEGNTNRIVGTYGYMAPEYVIHGLFSTKSDVFSFGILLLEIVSGKKNREVTYPHHSHNLIGHTWKLWKEGTPEKLIDNCLEDASILSEAVRSIHIGLLCLQRQPNDRPNMSSVVVMLSSDNELPEPKEPGFLIDRILNEEQSEFRSQTSSTNEVTISILNVWLGVYGFSDFLGLSKGSRF 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01710 841 Gene3D Hepatocyte Growth Factor 343 424 - -
Phco9g01710 841 Pfam Domain of unknown function (DUF3403) 779 820 IPR021820 GO:0004674
Phco9g01710 841 Gene3D - 19 150 IPR036426 -
Phco9g01710 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Phco9g01710 841 Pfam Protein tyrosine and serine/threonine kinase 509 777 IPR001245 GO:0004672|GO:0006468
Phco9g01710 841 CDD PAN_AP_plant 344 427 - -
Phco9g01710 841 SUPERFAMILY Protein kinase-like (PK-like) 490 805 IPR011009 -
Phco9g01710 841 CDD STKc_IRAK 513 778 - -
Phco9g01710 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 471 582 - -
Phco9g01710 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 786 - -
Phco9g01710 841 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 768 - -
Phco9g01710 841 ProSiteProfiles Protein kinase domain profile. 507 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01710 841 ProSiteProfiles EGF-like domain profile. 292 328 IPR000742 -
Phco9g01710 841 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 184 IPR036426 -
Phco9g01710 841 CDD B_lectin 29 153 IPR001480 -
Phco9g01710 841 Pfam S-locus glycoprotein domain 212 326 IPR000858 GO:0048544
Phco9g01710 841 SMART blect_4 29 153 IPR001480 -
Phco9g01710 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 150 - -
Phco9g01710 841 Pfam PAN-like domain 344 412 IPR003609 -
Phco9g01710 841 SMART serkin_6 507 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01710 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 343 426 - -
Phco9g01710 841 Gene3D Transferase(Phosphotransferase) domain 1 583 788 - -
Phco9g01710 841 Pfam D-mannose binding lectin 71 179 IPR001480 -
Phco9g01710 841 SMART ntp_6 347 426 IPR003609 -
Phco9g01710 841 Gene3D Phosphorylase Kinase; domain 1 466 582 - -
Phco9g01710 841 ProSiteProfiles PAN/Apple domain profile. 344 427 IPR003609 -
Phco9g01710 841 PIRSF SRK 1 822 IPR024171 GO:0004674
Phco9g01710 841 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01710 Phco-Chr9 40280375 40284947 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01710 PK_Tyr_Ser-Thr 6.8e-47 CL0016