Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01706 ATGGCCATTCTTACTATTCTCCTATTTTTGTTCTTCTCTAAATTTTCGGCCACTTCAGATACCATCACCCAGTATGGGTCACTTGAAGAAGACAAGACCTTGGTTTCAAACAATGGAATCTTTGAGTTGGGTTTCTTCACCCCATCTACCACTTCCTCAAACCGCTATCTAGGAATCTGGTACACAGACATACCCCTCAGAACCGTTGTTTGGGTTGCAAACCGTGAAAGTCCAATCACTGACAACTCAACCAAGTTGAGCATAAACACACAGGGAGACCTCGTACTCAGCCACAGCAACACCGTTATTTGGTCAACTAACACAACAATAACAACAACAGGGGTGCTTGTGGTGGCACAGATTTTGGACTCAGGCAACTTGGTTCTCAGAGATGACAAAGAGACGAATCCTGAAAACTACTTCTGGCAGAGTTTTGACTATCCTTCAGACACGTTTCTTCCTGGCATGAAAATAGGGTGGGACTTGAAGAAAGGGCTTAACAGGGGTCTAACTGCGTGGAAAAACTGGGATGACCCTTCACCAGGGGACTTTACGGGATTCATTTCACGCACCAGTAATCCTGAAGAGGTTATGTGGAAGGGCTCAACAAAGTACTATAGAAGTGGCCCTTGGGATGGAACTAAATTAAGCGGTAGCCCCTCTTTGTCCAACTCGGTAATAAGCTACACGATTGTGTCCAACAAGGATGAATTTTACGCTACATATAGCACGGATGATAGGTCAGTGATTTCAAGACTTGTGTTGAATCAAACGCTTTATCTTCGTCAGCGCTTGACATGGAATAATGACGGTAAAACGTGGAAGGTGTCTTCTCAGTTGCCAAGTGATTTATGCGACCACTATAATATATGTGGCGCGTTTGGGATTTGTGACGTTAGTGAGGCACCCATGTGCAGATGTTTAGATGGATTCAAGCCAAAAGCACCCCAAAACTGGACCCAAATGAACTTCCATGAAGGGTGCGTGCACAACCAAACTTGGAGCTGCAGGGACAAGACTAAAGATGGGTTTCTCAGATTCAGTAACGTAAAGGTACCAGAGACTACATTTTCATGGGTTAATGCAAGTATGAAACTTGAGGAATGCAAGAACAAATGCTGGGAAAATTGCTCATGCAAAGCTTATGCAAATTCAGACATAACAGGAGAAGGTAGTGGGTGTGTCATTTGGTTAGGTGATCTGTTAGATATAAGAATCATGGCAAATGCTGGACAAGATCTGTATGTTAGATTGGCCGTGTCAGAAACAGAAAATCGACATGGGAATGATTCGAAGAGAAAGGTAGTGTTTGCAAGCACCATTTGCTCAGCTATGCTGATACTATTGATTTCCTTATTCATTTATTGGAGTAGCAAAAGAAAAACCAAAGTCAAAGGAATGGAAAATGAAAGCCAAGAAGACTTTGAGCAACCTTTGTTTGACCTTGCCTCAGTAGCACACGCAACAAATTACTTCTCAAATCAGAATAAGCTTGGTGAAGGTGGTTTTGGGCATGTATATAGGGGAACACTAACCGATGGACGAGAGATTGCTGTTAAGAGACTTTCACAGACATCTAAACAAGGATTAAAAGAATTTAAGAATGAGGTTATGTTATGTGCCCAACTTCAACATCGAAATCTAGTAAAAGTTCTTGGATGTTGCATTCAAGATAACGAGAAACTGCTTTTGTACGAATATATGGCCAACAAAAGCTTAGACTTCTTTCTTTTTGATTCTAGTGGAAGAAAATTGCTTGATTGGCCTAAGCGTCGTTGCATCGTTAATGGAATTGCTCGAGGATTACAATATCTTCATCAAGACTCCAGACTAAGGATCATACATAGAGATCTTAAGGCAAGTAATGTGTTATTAGATGATAAAATGAATCCAAAAATTTCAGATTTCGGTTTAGCTCGAATGTGTGGAGATGATCAAATTGAAGGACAAACAAACAAAGTAGTTGGTACATATGGTTATATGGCACCTGAATATGCTTTTGATGGAATATTTTCCACCAAATCTGATGTGTTTAGCTTCGGTGTCTTGTTGCTTGAGATAGTAAGTGGCAAGAAAAATAGGCTCTTTCATCCAAATGACTACAACAATCTTATTGGTCATGCATGGGGATTGTGGAGAGAGGGAAATGCAAAACAATTTATTGACTCTAGTTTGGAGGATTCAATCATTCTAAATGAAGCCTTACGTTGCATTCATATTGGTCTTTTATGTGTACAACATCATCCTAATGAAAGACCAAACATGGATTTCGTGATCACAATGTTGAACAACGAAAAGATATTGCCTCTTCCCAAGGAGCCTAACTACTTAATCAAAGAGATCTTAACTAGTAGAGAATCTTCTTTTCTGATTGAAACTTTTGTTGATGACCAGCTCTCCCTTCTCTCATTAGAGTTCTGGCAGAAATTGTTAAAGCTTCCTCCCAAAGTCAAATGGTCAACTCAATGTCTTCTCTGTGGGTCATCTCCTGGTCCCAATGATGTGAACCCCTTTCTTGATTTATATTTTTTTCTGCATAGGCTATGGCTTGGTGGATGGTCAGACCATGGTGAAAGGATGAGCGATTTTTATGCTTGCAATCGTTATGAAGAAGCAAAACATGAGGGAGTGGGTTTTTTAAACTGGAATTGGGGAGTACACTGCAGAAGAAAATTCACCTGCTTCGGTAGCCAATTGGCGAGAGGGGTTCGTGCGGCGAACGGAGGCGAGCTGTGTGATGGAGGTTGCATGGTGGCGTTCTCCGCAAGAGAGAACCAAAGCTACACTTCATTGCTCCCGCTCACCCACCCCCGCCGTGGAATTGTAATACCACCGGCAACTTTTTCCAGCAACCATTTGCCGACGGTGAAAAGTGTTGCTACCTGTGTGGGTGAAGCCAATTTCCTCACCTTTGGACAAGGTCCTGTGATAGAGATGTTAATGGTTTCATCTAGGAGTGTTATCAAGGATGAACAGTGTGCTGAAAAGGTCAATATATTGTTTTATGTGTCTACATTTCATTGA 3024 0.4147 MAILTILLFLFFSKFSATSDTITQYGSLEEDKTLVSNNGIFELGFFTPSTTSSNRYLGIWYTDIPLRTVVWVANRESPITDNSTKLSINTQGDLVLSHSNTVIWSTNTTITTTGVLVVAQILDSGNLVLRDDKETNPENYFWQSFDYPSDTFLPGMKIGWDLKKGLNRGLTAWKNWDDPSPGDFTGFISRTSNPEEVMWKGSTKYYRSGPWDGTKLSGSPSLSNSVISYTIVSNKDEFYATYSTDDRSVISRLVLNQTLYLRQRLTWNNDGKTWKVSSQLPSDLCDHYNICGAFGICDVSEAPMCRCLDGFKPKAPQNWTQMNFHEGCVHNQTWSCRDKTKDGFLRFSNVKVPETTFSWVNASMKLEECKNKCWENCSCKAYANSDITGEGSGCVIWLGDLLDIRIMANAGQDLYVRLAVSETENRHGNDSKRKVVFASTICSAMLILLISLFIYWSSKRKTKVKGMENESQEDFEQPLFDLASVAHATNYFSNQNKLGEGGFGHVYRGTLTDGREIAVKRLSQTSKQGLKEFKNEVMLCAQLQHRNLVKVLGCCIQDNEKLLLYEYMANKSLDFFLFDSSGRKLLDWPKRRCIVNGIARGLQYLHQDSRLRIIHRDLKASNVLLDDKMNPKISDFGLARMCGDDQIEGQTNKVVGTYGYMAPEYAFDGIFSTKSDVFSFGVLLLEIVSGKKNRLFHPNDYNNLIGHAWGLWREGNAKQFIDSSLEDSIILNEALRCIHIGLLCVQHHPNERPNMDFVITMLNNEKILPLPKEPNYLIKEILTSRESSFLIETFVDDQLSLLSLEFWQKLLKLPPKVKWSTQCLLCGSSPGPNDVNPFLDLYFFLHRLWLGGWSDHGERMSDFYACNRYEEAKHEGVGFLNWNWGVHCRRKFTCFGSQLARGVRAANGGELCDGGCMVAFSARENQSYTSLLPLTHPRRGIVIPPATFSSNHLPTVKSVATCVGEANFLTFGQGPVIEMLMVSSRSVIKDEQCAEKVNILFYVSTFH 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01706 1007 CDD PAN_AP_plant 335 419 - -
Phco9g01706 1007 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 179 IPR036426 -
Phco9g01706 1007 CDD STKc_IRAK 498 764 - -
Phco9g01706 1007 Gene3D Transferase(Phosphotransferase) domain 1 568 769 - -
Phco9g01706 1007 Pfam PAN-like domain 336 404 IPR003609 -
Phco9g01706 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Phco9g01706 1007 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 753 - -
Phco9g01706 1007 Pfam D-mannose binding lectin 68 174 IPR001480 -
Phco9g01706 1007 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 457 567 - -
Phco9g01706 1007 Gene3D Phosphorylase Kinase; domain 1 454 567 - -
Phco9g01706 1007 ProSiteProfiles Bulb-type lectin domain profile. 19 142 IPR001480 -
Phco9g01706 1007 SUPERFAMILY Protein kinase-like (PK-like) 472 762 IPR011009 -
Phco9g01706 1007 CDD B_lectin 27 148 IPR001480 -
Phco9g01706 1007 SMART ntp_6 339 418 IPR003609 -
Phco9g01706 1007 SMART blect_4 25 148 IPR001480 -
Phco9g01706 1007 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Phco9g01706 1007 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 15 145 - -
Phco9g01706 1007 ProSiteProfiles PAN/Apple domain profile. 336 419 IPR003609 -
Phco9g01706 1007 Pfam Protein tyrosine and serine/threonine kinase 494 760 IPR001245 GO:0004672|GO:0006468
Phco9g01706 1007 Pfam S-locus glycoprotein domain 206 314 IPR000858 GO:0048544
Phco9g01706 1007 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 568 769 - -
Phco9g01706 1007 SMART serkin_6 492 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01706 1007 ProSiteProfiles Protein kinase domain profile. 492 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01706 1007 Gene3D - 13 145 IPR036426 -
Phco9g01706 1007 ProSiteProfiles EGF-like domain profile. 281 317 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01706 Phco-Chr9 40228199 40237402 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01706 PK_Tyr_Ser-Thr 2e-48 CL0016