Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01699 ATGATAGAAACCGTACCAAAATCAATGGAGAGCTTTGAAATGCTTGTTGTGTGTGTTTTGTTCCTCTCTTTGATAACCATGTCCTCCACTTTGGACATGATTACTCCGACCCAACCCCTGAGAGATCCTGTGAATGAGAATGTAACTCTTGTCTCAACAAATGGAACCTTTGAAGCAGGATTCTTCAGCCATGAAAAATCCGGTAGCCGTTACCTTGGAATTTGGTACAAAAACATATCCCCCAGAACAGTTGTTTGGGTGGCCAACAAAGAAACACCACTTCAAGACCACTCTGGAGTCTTAGAAGTAGACGGTGATGAAGGGTTTCTTAGTATCAAAAATGGTACAGGAGCCAAAATATGGTTCTCAAATGCATCATCACACACACCAAGCAAACCAGTTGCTGTGGAGTTGTTGGAATCAGGAAACATGGTTGTGAAAGATGGCGACAACAACTTTTTATGGCAAAGCTTTGATTACCCAGATGATACTTTACTTCCAGGAATGAAACTTGGAATGAACTTCAAAACTGGTCATCATCGAGCTCTGAGATCATGGAAATCCTTCACAGATCCTACTCCAGGTGAATTTGTATTTGGTGTTGATACTCGTGGCCTTCCTCAACTAGTCATCACAAAGGAGCCTAGTGATTACATAGTTTATAGGCCAGGCTCTTGGAATGGTCTCAGTATCACAGGACTACCTGGAGAAATAACTGACCCATTAATTAAATCCTTTTTTGTTATGAATGAAGATGAAATCTTCTATCAGATTCAGCTCTTGAATAGTTCAACTAAGCTAAGAAGCAGATTGATCCCAGAAGGGTATCAAGTGCGTTTAATATGGTCAGATGAGACAAAAAGATGGGATACGCAATACCCTGGTTCATTTGATGAGTGTGAGAGATATAGCCTTTGTGGTGCAAATACTATATGCAATGTGAGTGGAGCACATCACTGTGAATGCTTGAGTGGATTTCAATCCAACTTTGCAGATTCTTGTGATCGAACTGCACCTCTGGACTGTAACAAGGGAGATAAATTTGAGAAGTACGAGGGAATGAAATTGCCAGACACATCTTCGTCTTGGTACGATAAGAGTATTAGTCTTCAGGAATGCGAGAAATTGTGCTTGAGCAACTGCTCTTGTACTGCATATGCTCAACTGAATATCAGTGTCCCGGGAAGTGGCTGCTTGCATTGGTTTCATGACATTGTTGACATCAGGATACTGGCACAGGGTGGACAAGATTTTTATCTGCGAATTACAACCCCAAAATTTCAAGATCACGCCTTCAACAGGAAGATAGGAGGAATTGTAGTTGGCTGTACTATATTCATCATTGTCCTTGTAGTATTTGGAATCATATTTTGCCTTAAGAGGAAGAAACTCAAGCAGTCAGAAACAAATTACTGGAAGGATAAGAATGAGAAGGATGACATTGATTTACCCATATTCGACTTTTTATCCATCTCCAATGCTACAAATAACTTTTCTGAGAGTAACAAATTGGGACAAGGGGGGTTTGGACCTGTGTACAAGGGCATATTATCAGATGGGCAAGAAATTGCAGTTAAGAGGCTTTCCAAAACTTCGGGACAAGGTTTGGAAGAGTTCAAAAATGAAGTAATGTTGATTGCAAAACTTCAACACCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATTCAGCAAGATGAAAAGATGCTAATTTATGAATTCATGCCAAATAGAAGCTTGGATTATTTTATTTTTGATTCAACAAGAAGTACATTAATTGGTTGGGCTAAGAGATTTGAAATTATTGGTGGAATTGCTAAAGGACTTCTTTATCTTCATCAAGACTCTAGACTAAAAATCATTCATAGGGATCTAAAGACCAGTAACGTTCTTCTTGATAGTAATATGAAACCAAAAATATCAGATTTTGGTATGGCTAGGACTTTTGGCCTGGATCAAGATGAAGCAAACACAAATAAAGTGATGGGAACATATGGCTATATGCCTCCTGAATATGCTGTGCATGGTTCATTTTCAGTCAAATCAGACGTATTCAGCTTTGGGGTGATTGTATTGGAGATAATCAGTGGGAGGAAGAATAGAGGATTTCGTGACCCAAACAATCAGCTAAATCTTCTTGGACATGCATGGAGACTATGGATTGAAAAAAGGCCAATGGAACTAATGGATGACTCAGTGGACAGTGTAGTTGTTCCATCTGAAATATTAAGATATATTCATGTTGGTTTGTTATGCGTGCAACAAAGACCAGAGGATAGACCAAACATGTCTTCAGTAGTTTTCATGTTGAACAGTGAAACATTATTGCCTGAGCCAACTCAACCTGGATTTTACACAGGAAAAAATAATTCGACCACAACAGATTCTTCTTCAAGAAATTGTGATGCGTATTCCCTGAACGAAATGTCTGAGACATTGGTTGAGGCAAGATAG 2451 0.3921 MIETVPKSMESFEMLVVCVLFLSLITMSSTLDMITPTQPLRDPVNENVTLVSTNGTFEAGFFSHEKSGSRYLGIWYKNISPRTVVWVANKETPLQDHSGVLEVDGDEGFLSIKNGTGAKIWFSNASSHTPSKPVAVELLESGNMVVKDGDNNFLWQSFDYPDDTLLPGMKLGMNFKTGHHRALRSWKSFTDPTPGEFVFGVDTRGLPQLVITKEPSDYIVYRPGSWNGLSITGLPGEITDPLIKSFFVMNEDEIFYQIQLLNSSTKLRSRLIPEGYQVRLIWSDETKRWDTQYPGSFDECERYSLCGANTICNVSGAHHCECLSGFQSNFADSCDRTAPLDCNKGDKFEKYEGMKLPDTSSSWYDKSISLQECEKLCLSNCSCTAYAQLNISVPGSGCLHWFHDIVDIRILAQGGQDFYLRITTPKFQDHAFNRKIGGIVVGCTIFIIVLVVFGIIFCLKRKKLKQSETNYWKDKNEKDDIDLPIFDFLSISNATNNFSESNKLGQGGFGPVYKGILSDGQEIAVKRLSKTSGQGLEEFKNEVMLIAKLQHRNLVKLLGCSIQQDEKMLIYEFMPNRSLDYFIFDSTRSTLIGWAKRFEIIGGIAKGLLYLHQDSRLKIIHRDLKTSNVLLDSNMKPKISDFGMARTFGLDQDEANTNKVMGTYGYMPPEYAVHGSFSVKSDVFSFGVIVLEIISGRKNRGFRDPNNQLNLLGHAWRLWIEKRPMELMDDSVDSVVVPSEILRYIHVGLLCVQQRPEDRPNMSSVVFMLNSETLLPEPTQPGFYTGKNNSTTTDSSSRNCDAYSLNEMSETLVEAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01699 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 462 573 - -
Phco9g01699 816 ProSiteProfiles EGF-like domain profile. 296 332 IPR000742 -
Phco9g01699 816 CDD B_lectin 43 161 IPR001480 -
Phco9g01699 816 ProSiteProfiles Bulb-type lectin domain profile. 35 159 IPR001480 -
Phco9g01699 816 ProSiteProfiles Protein kinase domain profile. 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01699 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 192 IPR036426 -
Phco9g01699 816 Pfam Protein tyrosine and serine/threonine kinase 501 766 IPR001245 GO:0004672|GO:0006468
Phco9g01699 816 SMART blect_4 41 161 IPR001480 -
Phco9g01699 816 Gene3D Hepatocyte Growth Factor 339 420 - -
Phco9g01699 816 FunFam Receptor-like serine/threonine-protein kinase SD1-8 26 158 - -
Phco9g01699 816 Pfam D-mannose binding lectin 83 187 IPR001480 -
Phco9g01699 816 Gene3D Phosphorylase Kinase; domain 1 471 573 - -
Phco9g01699 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Phco9g01699 816 CDD STKc_IRAK 504 770 - -
Phco9g01699 816 Pfam PAN-like domain 342 408 IPR003609 -
Phco9g01699 816 Pfam S-locus glycoprotein domain 221 329 IPR000858 GO:0048544
Phco9g01699 816 Gene3D Transferase(Phosphotransferase) domain 1 574 775 - -
Phco9g01699 816 SMART ntp_6 343 422 IPR003609 -
Phco9g01699 816 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Phco9g01699 816 Gene3D - 28 158 IPR036426 -
Phco9g01699 816 SMART serkin_6 498 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01699 816 MobiDBLite consensus disorder prediction 778 799 - -
Phco9g01699 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Phco9g01699 816 PIRSF SRK 4 816 IPR024171 GO:0004674
Phco9g01699 816 CDD PAN_AP_plant 339 422 - -
Phco9g01699 816 SUPERFAMILY Protein kinase-like (PK-like) 483 769 IPR011009 -
Phco9g01699 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01699 Phco-Chr9 40123700 40134141 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01699 PK_Tyr_Ser-Thr 1.4e-45 CL0016