Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01697 ATGTTGGCAATGATGTCATGTTATTGGTTCTTGGTATTCTTCTGCATGTGGGGAACATGCACATCCCTGGACAGTTTAGCAGTGAGTCAAACCATCCGAGATGATAAGAATGAGACTTTGGTTTCAGCAGGTGGAATTATTGAACTGGGTTTCTTGGACCTGGGAAATTCATCCAGGAGATACTTAGCTATATGGTACAGAAATGTATCCCCTAGAACAGTTGTGTGGGTGGCTAACAGAAATACACCTCTTGATAATAGATCAGGAGTTCTCAAACTCAATGAGAAAGGGATTCTTGTGCTACTCAATGGCACACACAGCATTATTTGGTCATCCAACATCTCAGGCAAAGCAGTGAATGATCCAATTGCTCAGCTCTTGGATTCGGGAAATTATGTAGTGAAAATTGGACAGGGAACCGTCAAGGAGAGTATCTTGTGGCAGAGTTTTGATGATACGAGTGATACAATTTTGCCTGGAATGAAGCTTGGATGGAACTTAGAAACTGGTAAAGAAAGATATATGTCATCATGGAAAAGTGCTGATAATCCTGCTGAGGGAGAATATAGTGTTAAACTTGACCGTAGAGGATATCCTCAAGCAATTATATTCAAGGGATCTGAGATGAAGTTCAGACTTGGGCCATGGAATGGCCTGTCATGGGCAGGGTATCCTGTTAGAAGTCCTCAAAGTTCACAAATATTTGTATTTAATAAAACAGAATTGTATTATGAGTTCGGGCTTCTGGATAGTTCGGACATCATCAGCATATTTCAGCTAACCCCATCTGGCATTGGTCAGAAAATATTTTGGAAAACTCACACCACCACCGAGAGAGTTCTCCTGCCTCAGGAGAGAGATCAATGCGAGACTTATGCTTTTTGTGGTGCAAATTCCATATGCAGTTATGATGGTAACCATCCAACTTGTGAATGCCTGAGAGGATATGTTCCCAAGTCTCCTCATCAGTGGAACATGACAATTTGGCACCAGGGTTGTGTTCCAAGGAATAAGTCTAATTGCAAAAACAGTTATACGGATGGCTTCTTACCCTACTCACACATGAAATTGCCAGATACATCTTCTTCGTGGTTTGATACAACTGTGAACCTTGAGGAATGTCACAAGTTATGTCTTAAACATTGCTCTTGTATTGCATATGCAAATTTAGATATTCGTGAAGGAAGTGGCTGCCTACATTGGTTCAATACTCTAGTTGACTTGAGGAATTTCTCTCAATTCGGGCAAGACATTTACATCAGAGTCCCTGCTTCAGAATTAGATCATGGTGGCCATGGAAACATGAAGAATAAGATAGTAGGAATCACTGTTGGTGTGATAATTTTGGGTTTAATCATCACATGTGTCTGCATACTGATAATTAAAAATTCAGTGGCAGCAAGTGTATATTGTCATATGGTACAACTTCAATGGCGGAAAGAATACTTCAGATTGAGGAATGAAGACATGGATTTTCCAACATTTGAGTTGTCTATCATTGCTAAAGCCACTAATAATTTTTCCAGCAGTAATAAAATAGGTGAAGGTGGATTTGGACCAGTTTATAAGGGTACACTGCTAGATGGGAAAGAGGTGGCAGTAAAACGGAACTCATTGATGTCTGATCAAGGACAGAACGAGTTGAAAAATGAAGTTGTTTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAACTGTTAGGTTGCTGCATTCAAGGAGAGGAAAAGTTGTTGATCTATGAATACATGCCTAACAAGAGCTTAGACTACTTCATCTTTGATGAAACCAGAAGCAAGCTCTTAGCCTGGCATCAACGTTTTCACATCATTTGTGGCATTGCTCGAGGGATTCTCTATCTTCACCAAGACTCTAGCTTAAGAATTATTCACAGAGATTTGAAAACCAGCAATATCCTATTAGATGCCTATATGAATCCTAAAATCTCAGACTTTGGCATGGCTCGGACTTTTGGCAGTGATCAAGTTGAAGACAAAACCAGAAAAGTGGTTGGAACGTATGGCTACATGCCTCCAGAGTATGCTGTTCATGGCCATTACTCTGTGAAATCAGATGTCTTTGGTTTTGGTGTGATAGTACTAGAGATAGTTAGTGGAAACAGGAACAGGGGATATTCTGACCCAGAACACTCTCTTAATCTTCTTGGGCATGCATGGAGACTATGGACTGAAGAAAGGCCAATGGAACTAATAGATAAACAAATACGTGAAAGATGCATTCTTTTTGAAGCCTTAAGATGCATACACGTGGGTTTGTTATGTGTGCAACAAAAACCAGAAGATAGGCCAGACATGTCTTTTGTCATTCCTATGCTGAATGGCGAGAAATTATTGCCTCGGCCAAAAGCTCCTGGATTTTATACAGGAGGGTGTACTCCTGAATCAGTATCATCATCGAAAACATGCAATCTTTTATCAAGAAATGAGATGTCCCTCACAATTTTTGAGGCAAGATAG 2475 0.4008 MLAMMSCYWFLVFFCMWGTCTSLDSLAVSQTIRDDKNETLVSAGGIIELGFLDLGNSSRRYLAIWYRNVSPRTVVWVANRNTPLDNRSGVLKLNEKGILVLLNGTHSIIWSSNISGKAVNDPIAQLLDSGNYVVKIGQGTVKESILWQSFDDTSDTILPGMKLGWNLETGKERYMSSWKSADNPAEGEYSVKLDRRGYPQAIIFKGSEMKFRLGPWNGLSWAGYPVRSPQSSQIFVFNKTELYYEFGLLDSSDIISIFQLTPSGIGQKIFWKTHTTTERVLLPQERDQCETYAFCGANSICSYDGNHPTCECLRGYVPKSPHQWNMTIWHQGCVPRNKSNCKNSYTDGFLPYSHMKLPDTSSSWFDTTVNLEECHKLCLKHCSCIAYANLDIREGSGCLHWFNTLVDLRNFSQFGQDIYIRVPASELDHGGHGNMKNKIVGITVGVIILGLIITCVCILIIKNSVAASVYCHMVQLQWRKEYFRLRNEDMDFPTFELSIIAKATNNFSSSNKIGEGGFGPVYKGTLLDGKEVAVKRNSLMSDQGQNELKNEVVLIAKLQHRNLVKLLGCCIQGEEKLLIYEYMPNKSLDYFIFDETRSKLLAWHQRFHIICGIARGILYLHQDSSLRIIHRDLKTSNILLDAYMNPKISDFGMARTFGSDQVEDKTRKVVGTYGYMPPEYAVHGHYSVKSDVFGFGVIVLEIVSGNRNRGYSDPEHSLNLLGHAWRLWTEERPMELIDKQIRERCILFEALRCIHVGLLCVQQKPEDRPDMSFVIPMLNGEKLLPRPKAPGFYTGGCTPESVSSSKTCNLLSRNEMSLTIFEAR 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01697 824 SUPERFAMILY Protein kinase-like (PK-like) 489 778 IPR011009 -
Phco9g01697 824 CDD STKc_IRAK 513 780 - -
Phco9g01697 824 SMART serkin_6 507 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01697 824 Pfam PAN-like domain 341 408 IPR003609 -
Phco9g01697 824 PIRSF SRK 1 824 IPR024171 GO:0004674
Phco9g01697 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 184 IPR036426 -
Phco9g01697 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Phco9g01697 824 ProSiteProfiles Protein kinase domain profile. 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01697 824 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 768 - -
Phco9g01697 824 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Phco9g01697 824 CDD PAN_AP_plant 338 423 - -
Phco9g01697 824 Pfam Protein tyrosine and serine/threonine kinase 510 776 IPR001245 GO:0004672|GO:0006468
Phco9g01697 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 340 422 - -
Phco9g01697 824 ProSiteProfiles EGF-like domain profile. 285 322 IPR000742 -
Phco9g01697 824 CDD B_lectin 37 151 IPR001480 -
Phco9g01697 824 SMART blect_4 29 153 IPR001480 -
Phco9g01697 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 582 - -
Phco9g01697 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 150 - -
Phco9g01697 824 Pfam D-mannose binding lectin 73 179 IPR001480 -
Phco9g01697 824 Gene3D - 20 151 IPR036426 -
Phco9g01697 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 786 - -
Phco9g01697 824 Gene3D Transferase(Phosphotransferase) domain 1 583 784 - -
Phco9g01697 824 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Phco9g01697 824 SMART ntp_6 344 422 IPR003609 -
Phco9g01697 824 ProSiteProfiles Zinc finger SWIM-type profile. 367 409 IPR007527 GO:0008270
Phco9g01697 824 Gene3D Phosphorylase Kinase; domain 1 469 582 - -
Phco9g01697 824 Gene3D Hepatocyte Growth Factor 340 419 - -
Phco9g01697 824 ProSiteProfiles PAN/Apple domain profile. 341 423 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01697 Phco-Chr9 40036047 40039464 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01697 PK_Tyr_Ser-Thr 2.3e-45 CL0016