Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01696 ATGGTAAGACTTTGGTTTCTGCAGGTGGAATCACTGAAGCTGGTTTCTTTAGCCCAGGAAATTCAACAAGATGATACTTGGGTATATGGAGTTCTCAAACTCAATGAAAAAGGGATTCTTGTTCTTCTCAATGCTACAAACAACACCATTTGGTCATCATCCAACATCTCAAGCAAAGCAGGGAATGATCCAATTGCTCAGCTCTTGGATTCGGGAAATTTTGTAGTTAAAAAGGGACAAGAAACCAATGGCGTCTTATGGCAGAGTTTTGATTATCCGGGTGATACATTTATGCCCGGAATGAAACTTGGATGGGACTTAGAGACTGATTTCGAAAGGTTTGTATCATCTTGGAAAAGTGTTGATGATCCTGCTGAGGGAGAATATGCTCTAAAAATGAATCTTAGCGGATATCCTCAAATGATCACGTTCAAGGGACCTGATAAAGAGTTTAGAGCTGGGTCGTGGAATGGCTTGTCTCTAGTGGGAAATCCAGGTCCAACCTACGGCACGGCACCAAGATTCGTGCTCAATGAAAAAGAGGTGTATTACGAGTACGGGATTGAGGATAGTTCGTCGTTTATCGTATATAAAGTGACCCCTTTAGGAGGACAAATTTTGTTTTGGACAACTCAGACAAGAACTCAACAAGTTCTCTCAAGTGGGAAGCAAGATCGATGCGAGAGTTATGCCTTTTGTGGTGCAAATTCTATATGCAATTATGATGGTAACCATCCAAGTTGTGAATGCCTTAGAAGTTATGTTCCCAAGTCTTCTGATCAGTGGAATATATCAATTTGGCTCAATGGTTGTGTTCCAAGGAATAAAACTAATTGCACAAATAGTTACACAGATGGCTTCTTGAAGTACACACACATGAAATTGCCAGACACTTCTTCATCACGGTTTGATGCAGCTATGAGCCTTGATGAATGTCAGCAGTCATGCCTTATGAACTGTTCTTGTACAGGTTATGCAAGTTTAAATGTTCTTGATGGAGGTAGTGGCTGTCTACTTTGGTTTAATGATCTAGTTGACATGAGGAATTTCTCAAAGTGGGGACAAGACTTCTATATCAGAGTCCCTGCTTCAGAATTAGATCGTGGAAAGGACAAGAAAAACATTATAAGAATCATTGTTGGTGTGACTATTTTTGGATTAATCATATGTGTATGCATACTGGGAATTAAAAAGTCAGGGGCTGCAAGAAAATTTTGCAACAAGCATTACAAAAATATGCATAGGAGGGAAGACACAGATTTGCCAACTTTCGATTTCTCAGTCTTAGCCAGTGCCACTGGAAACTTTTCAATTGAAAACAAGCTTGGGGAAGGGGGTTTTGGACCAGTATACAAGGGAACCCTGATAGATGGGAAAGAGTTAGCTGTGAAAAGGCTTTCTCATAAATCTTGGCAAGGGTTGGACGAGTTCAAAAATGAAGTTGCATTGATGACCAAACTTCAGCATCGTAATCTGGTAAAACTTCTTGGTTGTTGCATTGAAGGAGAAGAAAAAATGCTGATTTATGAGTACATGCCCAACCATAGCTTGGACTACGTTGTTTTTGATGAAAGTAAAAGGAAGTTCTTAGATTGGCGTAAGCGTTTCAACATTATTACTGGTGTTGCTCGAGGACTGCTTTATCTTCATCAAGACTCTAGGTTGAGGATTATTCATAGAGATCTAAAAACTAGTAATATTTTACTAGATGCAAATTTGGATCCCAAAATATCAGACTTTGGCTTGGCTCGATTGTTTTTGGGAGATCAAGTCGAGGCAAAAACGAATAGGGTAGCTGGAACATATGGCTACATACCTCCTGAATATGCTATGCATGGGCATTTCTCAGTGAAATCAGATGTCTTTAGTTATGGTGTCATTGTACTAGAACTTCTAAGTGGGAAGAAAAATCGAGAATTTTCGGACCCAGAACACTGCAACAATCTTCTTGGACATGCATGGAAATTATGGACTGAAGACAGGGTACTGAAACTACTAGATGAAGTGTTAGAAAAACAGTGTACGCTGTTTGAAGTTATACGACGTATACAAGTAGGTCTATTATGTGTGCAACAAAGACCAGATGATAGACCAGACATGTCATCTGTGGTTTTAATGCTAAATGGCGATAACTTGTTGCCAAAGCCAAACGTTCCTGGTTTTTACACTGAAATTGATGCTACTTGCAAAGCAAATTCTTCATCAGCAAATCACAAACCGCTCTCAGTTAATGAACTTTCCATCACAGAGTTAGACGCTAGATAG 2265 0.3956 MVRLWFLQVESLKLVSLAQEIQQDDTWVYGVLKLNEKGILVLLNATNNTIWSSSNISSKAGNDPIAQLLDSGNFVVKKGQETNGVLWQSFDYPGDTFMPGMKLGWDLETDFERFVSSWKSVDDPAEGEYALKMNLSGYPQMITFKGPDKEFRAGSWNGLSLVGNPGPTYGTAPRFVLNEKEVYYEYGIEDSSSFIVYKVTPLGGQILFWTTQTRTQQVLSSGKQDRCESYAFCGANSICNYDGNHPSCECLRSYVPKSSDQWNISIWLNGCVPRNKTNCTNSYTDGFLKYTHMKLPDTSSSRFDAAMSLDECQQSCLMNCSCTGYASLNVLDGGSGCLLWFNDLVDMRNFSKWGQDFYIRVPASELDRGKDKKNIIRIIVGVTIFGLIICVCILGIKKSGAARKFCNKHYKNMHRREDTDLPTFDFSVLASATGNFSIENKLGEGGFGPVYKGTLIDGKELAVKRLSHKSWQGLDEFKNEVALMTKLQHRNLVKLLGCCIEGEEKMLIYEYMPNHSLDYVVFDESKRKFLDWRKRFNIITGVARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKISDFGLARLFLGDQVEAKTNRVAGTYGYIPPEYAMHGHFSVKSDVFSYGVIVLELLSGKKNREFSDPEHCNNLLGHAWKLWTEDRVLKLLDEVLEKQCTLFEVIRRIQVGLLCVQQRPDDRPDMSSVVLMLNGDNLLPKPNVPGFYTEIDATCKANSSSANHKPLSVNELSITELDAR 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01696 754 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 27 694 - -
Phco9g01696 754 SMART ntp_6 282 361 IPR003609 -
Phco9g01696 754 Gene3D Phosphorylase Kinase; domain 1 409 511 - -
Phco9g01696 754 CDD STKc_IRAK 442 709 - -
Phco9g01696 754 CDD PAN_AP_plant 278 362 - -
Phco9g01696 754 Gene3D - 7 90 IPR036426 -
Phco9g01696 754 ProSiteProfiles Protein kinase domain profile. 436 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01696 754 Pfam Protein tyrosine and serine/threonine kinase 437 705 IPR001245 GO:0004672|GO:0006468
Phco9g01696 754 ProSiteProfiles Bulb-type lectin domain profile. 1 89 IPR001480 -
Phco9g01696 754 Pfam S-locus glycoprotein domain 151 258 IPR000858 GO:0048544
Phco9g01696 754 Gene3D Hepatocyte Growth Factor 278 358 - -
Phco9g01696 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 557 569 IPR008271 GO:0004672|GO:0006468
Phco9g01696 754 ProSiteProfiles PAN/Apple domain profile. 279 362 IPR003609 -
Phco9g01696 754 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 278 361 - -
Phco9g01696 754 SMART serkin_6 436 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01696 754 Pfam D-mannose binding lectin 30 119 IPR001480 -
Phco9g01696 754 Pfam PAN-like domain 279 347 IPR003609 -
Phco9g01696 754 PIRSF SRK 2 754 IPR024171 GO:0004674
Phco9g01696 754 SUPERFAMILY alpha-D-mannose-specific plant lectins 30 124 IPR036426 -
Phco9g01696 754 SUPERFAMILY Protein kinase-like (PK-like) 420 718 IPR011009 -
Phco9g01696 754 SMART blect_4 2 93 IPR001480 -
Phco9g01696 754 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 401 511 - -
Phco9g01696 754 Gene3D Transferase(Phosphotransferase) domain 1 512 713 - -
Phco9g01696 754 FunFam - 512 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01696 Phco-Chr9 40015370 40018576 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01696 PK_Tyr_Ser-Thr 2.1e-46 CL0016