Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01695 ATGTTATTTATGTGGTTCTTCTTGTTCTTATACTTGACTACAACTTCCACTGCTGCTTTAGACAGTTTAGCAGTGAGTCAATCCATTCAAGATGGTAATAATGAGACTTTGGTTTCAGCAGGTGGAATTACTGAACTGGGTTTCTTCAGCCCAGAGAATTCTGCAAGAAGATATTTGGGAATATGGTTCAGAAATGTATCCCCTTTGACAATAGTGTGGGTGGCTAACCGAAATACCCCTCTTGAGAATAACTCAGGAGTTTTCAAACTCAACGAAAAAGGGATTCTTCAGCTTCTCAATGCAACAAACAGCAGCATTTGGTCAACATCATCCAACGTATCAAGCAAAGCAGGGAATAATCCAATTGCTCGACTAATGGACACGGGAAATTTGGTAGTGAGAAATGCACGAGAAACCAACGAGGAGGATGTGTTGTGGCAGAGTTTTGATCATCCATGTGACGCATATTTGCCAGGAATGAAGATTGGATGGAACTTGGAAACTGGTCTAGAAAGTTTTATATCATCTTCGGTTAGTGATACCGATCCTGCTGTGGGAGAATATACAATAGAAGTTTCTCTTATAGGGTATCCTCAAGTAATGAACTTCAAGGAAGGTGTTTTAGTAACCAGAGCAGGTTCATGGAATGGCTTGTCACTGGTTGGAAATCCAGGAGCAACTCTTGGAACGTCACCAAATCTTGTGATTAGCGAAAAAGAAGTGTATTATGAGTATGAGCTTCTTGATCAATCTGCATTTTTTGTGTATATACTAACCCCTTCAGGCACAGGAAAGAGTTTGTATTGGACAACAGAAACAAGAACAGCACATGTGATCTCAACTGGGAAGCAAGATCAGTGCGAGGATTATGCCTTTTGTGGTAACAATTCTATATGCAGTTATGATGGTAACTATGCAAGTTGTGAATGTCTCAGAGGGTACGTTCCCAAGTCTCCTGAGCAGTGGAATAAGTCAGTATGGGGCAACGGTTGTGTTCCAAAGAACAAATCTACTTGTGAAAATAGTCATACAGATGGCTTCATCAAGTACACATACATGAAATTGCCAGACACTTCTTCATCATCGTTTAATACAACGATGAACCTTAATGAATGTTATAATTCATGTCTTGGAAACTGTTCTTGTACAGCATATGCAAATTTAGATGTTCGTGGTGGAGGAAGTGGATGTCTACTTTGGCTAGATAATCTAGTTGACATGAGGAGTTTCTCTCAATGGGGACAAGACTTCTATGTCAGAGTCCCTGCTTCAGAATTAGATCACGCTGGCCAAGGAAACATCAAGAAGATGATAGTAGGAATCACTGTTGGTGTGACTATCTTTGGATTACTCATCTCATGTGTATGCATATTTATAATTAAGAATCCAGGTGCTGCAAGAAGAATTTTCAACAGGCATTACAGAAATATAGTACCCATGAAGGAAGAGATTGATTTACCAACTTTCGATATGTCAGTCTTAGTTAATGCCACTGAAAATTTTTCAACAAGAAACAAGCTTGGGGAAGGTGGATTTGGACCAGTATACAAGGGCACACTATTAGATGGGAAAGAGATTGCAGTGAAGAGGCTTTCAAATAAATCTGAACAAGGGTTGGACGAGTTCAAAAATGAAGTGGCATTGATTTCCAAACTTCAGCACCGTAATCTTGTAAAGCTTTTTGGTTGCTGCATTGAAGGAGAAGAAAATATGTTGATTTATGAGTACATGTCAAACAAGAGCTTGGACTACTTTGTTTTTGATGAAACCAAAAGAAAGCTCCTAGATTGGCATAAGCGTTTCAACATTATTAATGGCATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCCAGACTGAGGATTATTCACAGAGATCTTAAAACTAGCAATATTTTGTTAGATGAACATTTGGATCCCAAAATATCAGACTTCGGCTTGGCTCGATCATTTTTGGGAGATCAAGTTGAGGCAAACACAAACAGGGTGGCTGGAACATATGGTTACATACCTCCTGAGTATGCTGCACGTGGGCATTTCTCAGTGAAATCAGATGTGTTTAGTTATGGTGTAATAGTTCTAGAGATTATAAGTGGGAAGAGAAACTCAGAATTTTTGGACCCATGGCACGACAATAATCTTCTAGGATATAAATTATTGCGAAAGCCAAAGGTTCCAGGATTTTACACTGAAGTAGATGTTACATCCCAGGCGAATTCTTCATCAGCAATTCTCAAACCCAACTCTCATAATCAACTTTCCATCACAATGTTAGATGCGAGATAG 2286 0.3915 MLFMWFFLFLYLTTTSTAALDSLAVSQSIQDGNNETLVSAGGITELGFFSPENSARRYLGIWFRNVSPLTIVWVANRNTPLENNSGVFKLNEKGILQLLNATNSSIWSTSSNVSSKAGNNPIARLMDTGNLVVRNARETNEEDVLWQSFDHPCDAYLPGMKIGWNLETGLESFISSSVSDTDPAVGEYTIEVSLIGYPQVMNFKEGVLVTRAGSWNGLSLVGNPGATLGTSPNLVISEKEVYYEYELLDQSAFFVYILTPSGTGKSLYWTTETRTAHVISTGKQDQCEDYAFCGNNSICSYDGNYASCECLRGYVPKSPEQWNKSVWGNGCVPKNKSTCENSHTDGFIKYTYMKLPDTSSSSFNTTMNLNECYNSCLGNCSCTAYANLDVRGGGSGCLLWLDNLVDMRSFSQWGQDFYVRVPASELDHAGQGNIKKMIVGITVGVTIFGLLISCVCIFIIKNPGAARRIFNRHYRNIVPMKEEIDLPTFDMSVLVNATENFSTRNKLGEGGFGPVYKGTLLDGKEIAVKRLSNKSEQGLDEFKNEVALISKLQHRNLVKLFGCCIEGEENMLIYEYMSNKSLDYFVFDETKRKLLDWHKRFNIINGIARGLLYLHQDSRLRIIHRDLKTSNILLDEHLDPKISDFGLARSFLGDQVEANTNRVAGTYGYIPPEYAARGHFSVKSDVFSYGVIVLEIISGKRNSEFLDPWHDNNLLGYKLLRKPKVPGFYTEVDVTSQANSSSAILKPNSHNQLSITMLDAR 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01695 761 ProSiteProfiles Bulb-type lectin domain profile. 22 146 IPR001480 -
Phco9g01695 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 421 - -
Phco9g01695 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 576 - -
Phco9g01695 761 SMART serkin_6 501 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01695 761 ProSiteProfiles EGF-like domain profile. 283 320 IPR000742 -
Phco9g01695 761 Gene3D Phosphorylase Kinase; domain 1 476 576 - -
Phco9g01695 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Phco9g01695 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 15 149 - -
Phco9g01695 761 Pfam S-locus glycoprotein domain 211 318 IPR000858 GO:0048544
Phco9g01695 761 PIRSF SRK 1 752 IPR024171 GO:0004674
Phco9g01695 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Phco9g01695 761 SMART blect_4 28 152 IPR001480 -
Phco9g01695 761 SMART ntp_6 342 421 IPR003609 -
Phco9g01695 761 Gene3D Transferase(Phosphotransferase) domain 1 577 754 - -
Phco9g01695 761 CDD PAN_AP_plant 336 422 - -
Phco9g01695 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 577 668 - -
Phco9g01695 761 Pfam Protein tyrosine and serine/threonine kinase 503 701 IPR001245 GO:0004672|GO:0006468
Phco9g01695 761 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Phco9g01695 761 Pfam PAN-like domain 339 407 IPR003609 -
Phco9g01695 761 Gene3D Hepatocyte Growth Factor 338 418 - -
Phco9g01695 761 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 704 - -
Phco9g01695 761 SUPERFAMILY Protein kinase-like (PK-like) 475 710 IPR011009 -
Phco9g01695 761 CDD B_lectin 32 152 IPR001480 -
Phco9g01695 761 Pfam D-mannose binding lectin 70 176 IPR001480 -
Phco9g01695 761 ProSiteProfiles Protein kinase domain profile. 501 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01695 761 Gene3D - 15 149 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01695 Phco-Chr9 40007240 40010500 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01695 PK_Tyr_Ser-Thr 2.6e-45 CL0016