Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01688 ATGGCATTAACTTCTTCTACTCTCGCATCCTTGACATCATTCCTTTGCCTGTTTATGTTTTGTGTTAATGCAGTCACCTACAAAGAATTTTTGCAAATAGGACAATCATTGGGAACCTTAGACTCCGTTGCTTCTGATAGCGGGAAGTTCGAATTGTGCTTTTTCACCAGAGTCAGAGATAACTCCACCAAGTACTACGTTGGTATACGGTATAAAAGGGTTCCAAACGACAAGAACAAGATTGTGTGGGTTGCTAACCGAGACTACGCATTAGAAACATCCTCGGCAGTTCTCACCATTCAACCCGATGGAAATTTTGTGATCATGGATGGACAAGTTACATACCGTGTCAACGAGGTTTCAAACAATTTTAGTACCTATGCCATGCTCTTGGATTCAGGAAACTTGTTACTGCTGAAAACCTCAAATAAAGAGATTTTGTGGCAGAGTTTTGATCATCCTACGGACACCCTTTTACCCGGAATGAAATTAGGACAAGATGAAGGTTACACTTGGTCGTTGCGATCATGGATAAGTGCAGATGACCCTGCCCCAGGAGCTTTTACCCTTGAGTGTGATTCGGGCAGGGTCAGTCTAATCATCAACAATGCTTCTAATGTGTTCTGGATTGACGACAGTTACAATGAAACTATTGTCAATGTTATTAGCCGAAGTGGTATGGAAGTGTACGAACCCTATTTCACTTTGCCAGTTGGTAATGACTCTAGGCTGGTACTAGAAGTGTCTGGGGAGCTCAACCAGGAGTATTGGTCAGATGAAGCACGACTTTGGTTTTCTATTCAGTCATCCAAGTGTGCAACTAGCAATTCGTGTGGAGCTTTTTCCATCTGTAACCCGAAAGCTCTTGACCCTTGTGACTGCACTGATGGTTTCAGGCCGTTAGATGCTGATTCTTGGAACAAAGGGGAAAAATTCGCTGGCTGTGTCCGGAAAAAAGAGTTATCGTCCTGCAGTAACGGTGTTGAATCCAACGATAAATTCAAGCAACTCTTTAATGTGAAATGGCCACCGACTCCGGACAGTTACAAGACCATAAAGATCGACACAGCAACAGGGTGTCAACTTACTTGTTCCACAAATTGTTCTTGTGTTGCTTTTGCTTACTATTTGAACGGTAACTGCCAGTTGTGGTTTGGTTCGGTACTGAATCTAAAGAACGTCTCAACAGATGTGGACAATTCTGATGATAGCAATCCAATATTTAACCTAAGACTTGCTGCCTCAGAATTCGTTACTTCTGTTTCAAACGCAACAAGAGATAAAGAACCAGCAACTAATGATAGGAAGAATCTACGTGTGATTGTTTTACTGATCTCCCTTCTAACTTTACTTATATTGGGCCTATTAGTTTACTGGCTTAGAAGGAAGAGGAGAAAAGGGGAAGATTTGCTCCATTTTGATATAAGCATGAGCATGAAAGTTGAAGATTCAAAGCTTACTGAAGCACATAGGGGTGAGAAAGTGAAGAAGGAAGTAAAATTGCCATTATTCAGTTTCCAGAGCGTTGCAGCTGCAACTGATAATTTCTCACATGCCAATAAACTTGGTGAGGGTGGCTTTGGACCCATGCTGATTTATGAATTTATGCCTAATAAAAGCTTGGATCTTTTCCTTTTTACTGATGAAAACAAAGGGATGCTAGATTGGGGAACAAGAGTCAGAATAATTGATGGGATTGTCCAAGGAATTCTTTATCTTCATCAGTATTCCAGGTTCAGGATAATTCACCGAGATTTAAAAGCTAGCAACATATTGTTGGACACCAATATGAATCCCAAAATATCAGATTTTGGAATGGCAAAAATATTTGGTGAAAATGAACTTCAAGCAAATACAAACCGAATAGTTGGAACATATGGTTACATGGCCCCTGAATATGCTATGGAAGGACTTTTCTCAATAAAATCGGACGTGTTTAGTTTTGGGGTCCTTTTGTTGGAGATTATAAGTGGCAAGAAGAATACTGGCTTTTATCAAACCAGTTCCTTCAATCTTCTTGGATATGCTTGGGATCTTTGGACAAGGAATTCAGGAATGGAGCTAATGGATACTGCACTAGATGATAGTGATACTGGTGCTAATTGTCTGCATACTGTGCCAAGATATGTGAACATGGGACTTCTTTGCGTTCAAGAAAGCCCAGAAGATAGACCAACCATGTCTGATGTTGTATCAATGATTGGGAATGACACTGTACCCCTTCCTTCTCCTAAACCACCAGCATTTCTAAAGTTGAGAGGTGATGAAAGTTCAACACTGCCCTGCAGAATCACAGAAAGATTATCAGTGAATGTTATGACAGATACAATTGTGGAAGCAAGATGA 2346 0.4062 MALTSSTLASLTSFLCLFMFCVNAVTYKEFLQIGQSLGTLDSVASDSGKFELCFFTRVRDNSTKYYVGIRYKRVPNDKNKIVWVANRDYALETSSAVLTIQPDGNFVIMDGQVTYRVNEVSNNFSTYAMLLDSGNLLLLKTSNKEILWQSFDHPTDTLLPGMKLGQDEGYTWSLRSWISADDPAPGAFTLECDSGRVSLIINNASNVFWIDDSYNETIVNVISRSGMEVYEPYFTLPVGNDSRLVLEVSGELNQEYWSDEARLWFSIQSSKCATSNSCGAFSICNPKALDPCDCTDGFRPLDADSWNKGEKFAGCVRKKELSSCSNGVESNDKFKQLFNVKWPPTPDSYKTIKIDTATGCQLTCSTNCSCVAFAYYLNGNCQLWFGSVLNLKNVSTDVDNSDDSNPIFNLRLAASEFVTSVSNATRDKEPATNDRKNLRVIVLLISLLTLLILGLLVYWLRRKRRKGEDLLHFDISMSMKVEDSKLTEAHRGEKVKKEVKLPLFSFQSVAAATDNFSHANKLGEGGFGPMLIYEFMPNKSLDLFLFTDENKGMLDWGTRVRIIDGIVQGILYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMAKIFGENELQANTNRIVGTYGYMAPEYAMEGLFSIKSDVFSFGVLLLEIISGKKNTGFYQTSSFNLLGYAWDLWTRNSGMELMDTALDDSDTGANCLHTVPRYVNMGLLCVQESPEDRPTMSDVVSMIGNDTVPLPSPKPPAFLKLRGDESSTLPCRITERLSVNVMTDTIVEAR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01688 781 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Phco9g01688 781 Pfam Domain of unknown function (DUF3403) 736 781 IPR021820 GO:0004674
Phco9g01688 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 183 IPR036426 -
Phco9g01688 781 Pfam S-locus glycoprotein domain 220 300 IPR000858 GO:0048544
Phco9g01688 781 SMART serkin_6 450 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01688 781 Gene3D Transferase(Phosphotransferase) domain 1 538 739 - -
Phco9g01688 781 PIRSF SRK 529 781 IPR024171 GO:0004674
Phco9g01688 781 PIRSF SRK 1 530 IPR024171 GO:0004674
Phco9g01688 781 Pfam Protein tyrosine and serine/threonine kinase 529 733 IPR001245 GO:0004672|GO:0006468
Phco9g01688 781 Gene3D Phosphorylase Kinase; domain 1 487 537 - -
Phco9g01688 781 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 530 751 - -
Phco9g01688 781 SMART ntp_6 329 404 IPR003609 -
Phco9g01688 781 SUPERFAMILY Protein kinase-like (PK-like) 500 755 IPR011009 -
Phco9g01688 781 Pfam D-mannose binding lectin 81 177 IPR001480 -
Phco9g01688 781 CDD PAN_AP_plant 322 395 - -
Phco9g01688 781 Pfam PAN-like domain 328 390 IPR003609 -
Phco9g01688 781 Gene3D - 23 152 IPR036426 -
Phco9g01688 781 ProSiteProfiles Protein kinase domain profile. 445 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01688 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 536 742 - -
Phco9g01688 781 ProSiteProfiles PAN/Apple domain profile. 324 407 IPR003609 -
Phco9g01688 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Phco9g01688 781 SMART blect_4 28 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01688 Phco-Chr9 39801820 39805663 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01688 PK_Tyr_Ser-Thr 6.5e-30 CL0016