Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01687 ATGGATACTATAGCGAGCGTGGCATCAAGTGTGGCTGCACCTCTGCTGCGAAATCTCACCTACGTGTTGATGTACAGCACTTACCTGACAGAGCTGGAAACCGAGATTAAGAGGCTGCAGAGTGAGGAGAAGGAAGTGAGGCACACGGTTGAAGCTGCCAAAAGGGGTGGTGAAGAGATCGAGGACACCGTGCGTGACTGGTTCGACCGAGTGCGTTCAGCTGTGGAGCAGGGGCAGGCATTTCTTCAGGAGGAAGAGAGGGAAAGGGTTGGATGCATGGACGTGTACTTGAAGTACACCAACAGCCAGAGAGCGAGAACCTTGGTGGAGATTGTGAGGGAGGTGAGGAAAGAGACGTTTGATCGTGTTTCCTATAGGCGTGCCTTGAGATGCAATGTTAGTCCTGCTGCAAGAGAGTATGTTGCTATTCAATCGAGAACTGTGATGTTGAATGATGTTGTGAAGGTGTTGAAGGATGATGGAGTTGACATTGTTGGAGTGTATGGGATGGCCGGCGTGGGGAAAACTGCATTGGTGAAGGAATTGGCCTGGCAGGTTGAGAAGGATGGTTTGTTTGATGCGGTGGTGGTGGCCACAGTGACGGATTCGCCCGATGTGGGAAGGATCCGCAACGAGATTGCTGATGGGTTGGGGTTGAAGTTTGATGAGCTGACGGAGCTGGGGCGAGCGAGCCGGTTGCGCCAGAGGATTCGGCAGGAGCAGAAAATTCTTGTGGTGTTAGATGATATGTGGGGGAAGCTTGATTTGACAAAGGTTGGTGTGCCTTTTGGTGAGGACTACAAAGGTTGCAAATGCCAGTTGCTGATCACATCCAGGAATCTTAACGTGTTGAATTCTAATTTTGGGGCAGGAAAGTTTTATAGGCTTGAGGTGTTGTCTGAGGATGAAAGTTGGGAGTTGTTTGAGAAGAGGGGAGGGGATGTGGTTAGGGATCCTACCATTCAATCAGTGGCCAAAAAAGTAGCGAAGAGCTGTGGTGGATTGCCTCTTTTGATAGTCACAGTGGTGGAGGAATTGAAGAACAAGGATTTATATGCTTGGAAGGATGCATTGGAGCAGATAGCAAGTTTTGAACTTGAAGGGTGCCTTTATTCTCCTTTTCGTTCTGCTATTGAGCTGAGTTATGACCATTTGGAAAGTCATGAACTAAAAACTTTCTTCCTGCTTTTGGGTTCCATGGGAAATGGTTGCCGCACAAGAGATTTGTTGGTGTTTGGTTGGTGCCTGGGACTGCACAAACATGTTGATTCATTGACAGATGGGAGAAACAGGCTTTACAAATTGATAGACAACCTGAGAGCTGCTTGTTTGTTACTTGATGAGGGGGAAAGAGATTCAGTGGTGGCGCTTGAGGTGGTTCGACATGTGGCTGCCTCTATTGCATCCAGGGTCAAACCTTTCTTTACGGTGCAGAGAAACAAGGAATTGAAATGGCCAAGAATGGATTTCTTTCGAACTTGTCATCATATTTTCTTAGACTGGTGTTATATCCGCGAACTTCCTGAGGTGTTAGAATGTCCCAACTTGAAGATACTCCAAATAAATAGTCAAGGTAACTGTTTGAAAATCCCCGATGATTTCTTTGTTCAGATGAAAGAGTTGAAGGTTCTGAGTTTAGGAGGTATAAATGGTACTCCATCGCTCCCTCCGTCTCTCAGTCTCTTGACAGACCTCCAAGCATTGTATCTGTGTAAGTGCATGTTGGAAGACATAGCAACTGTTGGAGAAATCACAAGTTTAGAGATTCTCAGCTTGGAGAAATCCGAGCTTAAAGAGCTCCCTGCAGAAATAGGAGGATTAAGTAATCTTCGGTTGCTAGATTTGACTGATTGCTCAACACTAGGAGGAATTCCTGGCAACGTGCTATCGAGGTTGACAAGCTTGGAAGAGCTCTACATGGGAAACTGTGATGTTCAAGGGGAGGCTAAAGAGAGAAAAAGCGAAAACAATGATTTAAGTCTAGGTGAGTTAAAGCATTTGAATCAAGTAACAACTTTGAACGTGCAGATAGAAGATACTTCCGTTTTTCCTAGAGACATGCTTAGCTTAGGGAGACTAGAAAGCTACAAGATTTTGATTGGGGATGGTTGGAAATGGTCAGCGGTGGAGTCTGAGAATTACAAAGCTTCAAGACTTCTTAAGTTAAATTCGGGTGCAGATCCAAGCATTCTAAAGGACTATGGGATAAAGATGTTGATGACTAAGGCTGAAGATTTGTATTTAGCTGAACTCAAGGGTGTTCGAGAAGTACTTTATGAATTGAATGATGAAGGGTTTTCACAATTGAAGCATCTTTGCATCCTAAACTGTGCTGAAATGGAGAGCATCATTGGCTCAACGGAGTGGGCTTATAGTGATCATGCCTTCCCAAACTTGGAATCATTGATCCTTCACAATCTGATTAACATGGAGAGGATATGCAGTGACCCCCTTCCAGCACAGGGCTTTATCAAACTTCAAGTTATCAAAGTAAAGGGTTGTGATAGGATGGAGTTTCTTTTCTCGCATTCCATGGTTAAACACCTCTCTGAACTTGTTGAGATTGAGATTTCTGAATGCAAATCTATGACCAATATCTTATCTGGGCAAAGACAAGAGGATGCTGATGCTGGACAAACCGACAAGATCAGGCTCATCAACTTGCGTTCACTGACTCTGCAATGCTTACCTTCTCTTGTTAGTCTCTCTCCTGAGTCAAGTACTGGGGCTCCACAAAACGGCACTGGTTTCTCCAGTCAACTTTTTAATGACAAGGTTGAATTTCCAAACCTGGAGACCTTGAAGCTGTATTCAATCAATATCCACAACATATGGAATCACCAGCTTTCTTACTTTCAAAATTTGACCTCTTTGACCGTAGATGGATGTGAACGGTTGACATATATTTTCTCATACCCTGTGGCTATAAAACTTGTCAAGCTTGAACATCTTTTACTTAGTTCGTGCAAATTCGTAGAAAAGATATTTGTGCCGGATGAAAACCTGGGTCACATTCATCATTTTAGAAAATCCGCTCCAACTGAACTGGTTCCAATTTTCCCCAACCTGGAGACATTTGTGATTTCTCACATGGACAACTTGATATCAATATGGCCAGGCCTACTCCCTCAAAATTCGTTTTGTAAACTGAAAAAGATGGAAATCACATCCTGCAACAATCTCTTGAATGTGTTCCCATGTCATGTGCTAGACAAATTGCAGAGCCTGGAATCACTGAATGTATGGAACTGTATGGCACTGGAAGTTGTATATGAAATTGATGGTATAAACACAGAGCAAGAAGGTAGCAGTCAAGGAGGACTGGACATTCCACTGAGAACTTTGTCTTTGGGTAATTTACCAAAGCTAAAGCATTTGTGGAATACGGATCCTCAAGGAAATATCAGATTTCAAAACCTGTTTATGGTAAAAGCTTCTAAATGTAAAAGTCTAAAATATGTGTTTCCATTGTCTCTGGCCAAAGACCTTCTGCATCTCCAATTCCTTGAGATAAGTGATTGTGGGGTAGAGGAAATTATTGTTAGTGATAAGGGAGGGGTAGAGGCAGCTCTTGGGTTTGTTTTCCCAAAATTAGTATCCATAAAATTTTTTAAGTTGCCAGACCTTCGATGCTTTTGCAGTGGAAATCACAACCTCAGATTTCCATTGTTGAATCTATTTTATGCTGTTGAATGCCCTGCAATGGAGACTTTCTCTTGGGGAATTTTAAGGGCATCGATCCTTAGAAAAATACATTTGACTCAGGAAGGAGATCAGTGGTACTGGGAAGGTGACCTTAATACAACTATAAGAAAGCTTTTCAATAGAGATCTCCAAGCAAGATTAAGCACTCTATAG 3858 0.4318 MDTIASVASSVAAPLLRNLTYVLMYSTYLTELETEIKRLQSEEKEVRHTVEAAKRGGEEIEDTVRDWFDRVRSAVEQGQAFLQEEERERVGCMDVYLKYTNSQRARTLVEIVREVRKETFDRVSYRRALRCNVSPAAREYVAIQSRTVMLNDVVKVLKDDGVDIVGVYGMAGVGKTALVKELAWQVEKDGLFDAVVVATVTDSPDVGRIRNEIADGLGLKFDELTELGRASRLRQRIRQEQKILVVLDDMWGKLDLTKVGVPFGEDYKGCKCQLLITSRNLNVLNSNFGAGKFYRLEVLSEDESWELFEKRGGDVVRDPTIQSVAKKVAKSCGGLPLLIVTVVEELKNKDLYAWKDALEQIASFELEGCLYSPFRSAIELSYDHLESHELKTFFLLLGSMGNGCRTRDLLVFGWCLGLHKHVDSLTDGRNRLYKLIDNLRAACLLLDEGERDSVVALEVVRHVAASIASRVKPFFTVQRNKELKWPRMDFFRTCHHIFLDWCYIRELPEVLECPNLKILQINSQGNCLKIPDDFFVQMKELKVLSLGGINGTPSLPPSLSLLTDLQALYLCKCMLEDIATVGEITSLEILSLEKSELKELPAEIGGLSNLRLLDLTDCSTLGGIPGNVLSRLTSLEELYMGNCDVQGEAKERKSENNDLSLGELKHLNQVTTLNVQIEDTSVFPRDMLSLGRLESYKILIGDGWKWSAVESENYKASRLLKLNSGADPSILKDYGIKMLMTKAEDLYLAELKGVREVLYELNDEGFSQLKHLCILNCAEMESIIGSTEWAYSDHAFPNLESLILHNLINMERICSDPLPAQGFIKLQVIKVKGCDRMEFLFSHSMVKHLSELVEIEISECKSMTNILSGQRQEDADAGQTDKIRLINLRSLTLQCLPSLVSLSPESSTGAPQNGTGFSSQLFNDKVEFPNLETLKLYSINIHNIWNHQLSYFQNLTSLTVDGCERLTYIFSYPVAIKLVKLEHLLLSSCKFVEKIFVPDENLGHIHHFRKSAPTELVPIFPNLETFVISHMDNLISIWPGLLPQNSFCKLKKMEITSCNNLLNVFPCHVLDKLQSLESLNVWNCMALEVVYEIDGINTEQEGSSQGGLDIPLRTLSLGNLPKLKHLWNTDPQGNIRFQNLFMVKASKCKSLKYVFPLSLAKDLLHLQFLEISDCGVEEIIVSDKGGVEAALGFVFPKLVSIKFFKLPDLRCFCSGNHNLRFPLLNLFYAVECPAMETFSWGILRASILRKIHLTQEGDQWYWEGDLNTTIRKLFNRDLQARLSTL 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01687 1285 Gene3D - 298 386 IPR042197 -
Phco9g01687 1285 SMART AAA_5 161 302 IPR003593 GO:0016887
Phco9g01687 1285 Gene3D Ribonuclease Inhibitor 656 879 IPR032675 -
Phco9g01687 1285 Coils Coil 29 49 - -
Phco9g01687 1285 Gene3D Ribonuclease Inhibitor 880 1260 IPR032675 -
Phco9g01687 1285 SUPERFAMILY L domain-like 491 897 - -
Phco9g01687 1285 Gene3D - 122 288 IPR027417 -
Phco9g01687 1285 Pfam NB-ARC domain 149 379 IPR002182 GO:0043531
Phco9g01687 1285 PRINTS Disease resistance protein signature 332 346 - -
Phco9g01687 1285 PRINTS Disease resistance protein signature 164 179 - -
Phco9g01687 1285 PRINTS Disease resistance protein signature 605 621 - -
Phco9g01687 1285 PRINTS Disease resistance protein signature 237 251 - -
Phco9g01687 1285 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1112 1248 - -
Phco9g01687 1285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 396 IPR027417 -
Phco9g01687 1285 Gene3D Ribonuclease Inhibitor 468 655 IPR032675 -
Phco9g01687 1285 SUPERFAMILY RNI-like 885 1087 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01687 Phco-Chr9 39787561 39791885 Dispersed/Transposed