Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01684 ATGCATCGTTCCTTGCTGATGAACATCCCATCTAGGTTTCTCAGCCACCAAATGCAAACACAGGTGGACCAAGTTTTGCGAAAACGAGTTCTTGTTGATCCCTGTGATGTGTTCATAAACCACAGAAGCTTGGACACAAAAACAACTGTGGCTGCTCCTATTTATGATCATCTACGCAGACATGGGTTTCAGCCATTTCTGGACAACAAGACTCTGAAGCCAGGTGACAAACTGTTTGATAAAATTAACAGTACGATCTTGGAGTGCAAAATAGGGTTAGCTCTGATATCACCACGCTACTGTGACTCCTACTTTTGTCTTCACGAGCTTGCCCTTCTCATGGAGTGCAGAAAGAAGGTGATACCCCTCTTCGTTGACATTAAACCATCGCAATTACGCGTCATCAACAACAGAAAATGGACCCTCGAGGACCACCATCGCTTCAAATTCGCCATTGAAGAAGCAAAGCACACTGTGGGACTTACGGTCAACTCTGCACAAGGGAACTTCTCCGGTATTGTGACTAGTGCTTCTGATATCATCATCGAGAGCTTATTAGAGCTTGAGGATGAAGAGGTGATGATGCAGCATTCATACTTGCCAATTAGCTAA 612 0.4444 MHRSLLMNIPSRFLSHQMQTQVDQVLRKRVLVDPCDVFINHRSLDTKTTVAAPIYDHLRRHGFQPFLDNKTLKPGDKLFDKINSTILECKIGLALISPRYCDSYFCLHELALLMECRKKVIPLFVDIKPSQLRVINNRKWTLEDHHRFKFAIEEAKHTVGLTVNSAQGNFSGIVTSASDIIIESLLELEDEEVMMQHSYLPIS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01684 203 SMART till_3 34 180 IPR000157 GO:0007165
Phco9g01684 203 Pfam TIR domain 37 140 IPR000157 GO:0007165
Phco9g01684 203 Gene3D - 10 160 IPR035897 -
Phco9g01684 203 PANTHER COP1-INTERACTING PROTEIN-RELATED 28 193 - -
Phco9g01684 203 SUPERFAMILY Toll/Interleukin receptor TIR domain 35 156 IPR035897 -
Phco9g01684 203 ProSiteProfiles TIR domain profile. 33 156 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01684 Phco-Chr9 39753608 39756778 Dispersed/Transposed