Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01679 ATGTGCACATGCTGCAAACTATCTTATCCTCTCATACCCAAACAAATACTTCACTGTATAAATTCATTAGAATCACATTCTCGCTTCAACCAATTCAGTGGAACATTCCTAAACAACACACCCAATTCACATTTTTCTCTCTCTCAACTTCCAATGGCTCTCCAGGCTGCTTCTTTGGTTTCTGCTTCTTTCTCTGTTGCCAAAGAGGGAACTGCCATGTCTCTCAGGAACACCACAATGTTTGGTCTTTCAATGGCAGACGCTCTCAAAGCGGACTTCAGCTCTCCCTCATTTTCATGCAAAAGGGAATTCCAGCAAAAAATTTGTCCTTTAAGGGTCCAATCAGTGGCAACAACTCCAGGAGTGACAAAGGCTTCACCAGAAGGCAAAAAAACATTGAGGAAAGGAAGTGTTATTATCACTGGAGCTTCCTCTGGATTGGGCTTGGCCACTGCTAAGGCTTTGGCTGAGACAGGAAAGTGGCATGTGATAATGGCTTGCAGGGATTTCCTAAAAGCTGAAAGGGCTGCAAAAGCTGCTGGAATGGCTAAGGAAAACTACACTGTTATACATTTGGACCTTGCCTCCCTTGATAGTGTCAGACAATTTGTGTACAACTTCAGGCAATCAGGCAGGCCACTGGATGTGCTTGTTTGCAATGCTGCAGTTTACTTGCCAACTGCTAGTGAACCTACATACACGGCCGATGGCTTCGAACTCAGTGTTGGAACAAACCATTTGGGCCATTTCCTGCTTTCTCGACTATTGCTTGAGGACTTGAACAAATCTGATTACCCTTCTAAGAGGTTGATCATTGTAGGCTCTATTACAGGAAACACCAACACCTTGGCTGGAAATGTGCCACCAAAGGCTAACCTTGGTGACATGAGGGGACTAGCTGGAGGTTTGAATGGACTAAACACTTCAGCCATGATAGATGGAGGATCCTTTGATGGCGCAAAGGCCTACAAGGACAGCAAAGTCTGCAATATGCTTACCATGCAAGAATTTCACAGAAGATACCATGAAGAAACTGGAATCACATTTGCTTCCCTCTACCCGGGTTGCATTGCCACAACAGGCTTGTTCAGAGAACACATTCCCTTATTCAGACTTCTCTTCCCTCCATTCCAAAAGTACATAACCAAGGGCTTTGTCTCAGAAGATGAATCAGGAAAGAGGCTTGCACAGGTTGTAAGTGATCCAAGCCTAACAAAATCAGGTGTTTACTGGAGCTGGAACAAGGCCTCTGCTTCATTTGAAAACCAATTGTCACAAGAGGCCAGTGATGCAGATAAAGCTCGCAAGGTTTGGGAGATCAGTGAGAAACTTGTTGGTTTGGCTTAA 1347 0.4454 MCTCCKLSYPLIPKQILHCINSLESHSRFNQFSGTFLNNTPNSHFSLSQLPMALQAASLVSASFSVAKEGTAMSLRNTTMFGLSMADALKADFSSPSFSCKREFQQKICPLRVQSVATTPGVTKASPEGKKTLRKGSVIITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKAAGMAKENYTVIHLDLASLDSVRQFVYNFRQSGRPLDVLVCNAAVYLPTASEPTYTADGFELSVGTNHLGHFLLSRLLLEDLNKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDMRGLAGGLNGLNTSAMIDGGSFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGFVSEDESGKRLAQVVSDPSLTKSGVYWSWNKASASFENQLSQEASDADKARKVWEISEKLVGLA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01679 448 PRINTS Glucose/ribitol dehydrogenase family signature 137 154 IPR002347 -
Phco9g01679 448 PRINTS Glucose/ribitol dehydrogenase family signature 212 223 IPR002347 -
Phco9g01679 448 PRINTS Glucose/ribitol dehydrogenase family signature 345 362 IPR002347 -
Phco9g01679 448 PANTHER PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC 52 448 IPR005979 GO:0016630
Phco9g01679 448 Gene3D - 123 448 - -
Phco9g01679 448 Pfam short chain dehydrogenase 138 280 IPR002347 -
Phco9g01679 448 CDD LPOR_like_SDR_c_like 135 447 - -
Phco9g01679 448 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 133 414 IPR036291 -
Phco9g01679 448 NCBIfam protochlorophyllide reductase 134 448 IPR005979 GO:0016630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01679 Phco-Chr9 39611568 39613962 Dispersed/Transposed