Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01677 ATGGACAACCCAATCGCCGGCGAAGATTTCAGCTACCTTTCCGGCTTCGGAAACCACCACTCTTCCGAGGCTCTTCCCGGAGCTTTGCCGGAGGGGCAGAACAGCCCTCTCATCTGCCCCTTCGGTCTCTACGCCGAACAAATCTCCGGGACCCCCTTCACCTCCCCTCGCAACCGCAACCGCTTCAGTTGGTTTTACCGGATCAAACCATCAGTGACCCACGAACCGTTTAAACCTAGAGTACCTAGTAACAGGAAAATTTTCAGTGAGTTCAACAACTCCAACAGTTCTGCTAACCCAACTCAGCTTAGATGGAAGCCCATGGATGCTCCTGATTCACCAACGGATTTCATTGATGGGTTGTCCACCATTTGTGGTTCTGGCAGCTCTTTCATGCGCCACGGATATGCTATTCACATGTACGCTGCAAACAAATCAATGGACAATTGTGCCTTTTGCAATGCTGACGGTGACTTCTTGATAGTTCCCCAACAAGGAAGACTCTTAATCACTACTGAATGTGGAAGGTTGAAAGTTTCCCCGGGTGAAATTGCTATACTACCTCAAGGTTTTCGTTTTTCTGTGAATCTGCCTGATGGTCCATCGCGTGGTTATGTTGCTGAAATATTTGGTACTCATTTTGAACTTCCTGATCTGGGACCAATAGGTGCTAACGGTCTTGCTGCACCAAGGGATTTCCTTGTTCCTACTGCATGGTTTGAAGATAAATCCTATCCTGGGTACACTATAGTGCAGAAGTTTGGTGGTGAACTCTTTGCCGCAGTTCAAGATTTCTCTCCCTTCAATGTTGTTGCTTGGCATGGTAATTATTTTCCGTATAAGTATGATTTAAGCAAATTCTGCCCTTATAATACGGTTCTGTTTGATCATAGTGATCCATCAATCAATACTGTGTTGACAGCACCAACTGACAAACCTGGAGTGGCATTACTTGATTTTGTTATTTTCCCACCCAGATGGCTGGTTGCTGAGCACACTTTCCGGCCTCCATATTATCATCGCAACTGCATGAGTGAATTTATGGGCCTCATTCATGGTGGCTATGAGGCCAAGGCTGATGGATTTCTTCCTGGTGGTGCAAGTCTCCATAACTGTATGACTCCCCATGGTCCCGATACCAAGTCATATGAGGCTACCATTGCTCGAGGTAATGATATAGGACCTTCCAAGATCACAGACACAATGGCTTTTATGTTTGAATCAAGTTTGATACCTCGGATCAGTCAATGGGCCCTAGAATCACCCTTCTTGGATCAAGATTATTACCAGTGTTGGATTGGCCTGAGATCTCATTTTAATGTTAAAACCAGAGCGTGCGAAATGGACACTAAGGAGTGA 1359 0.4584 MDNPIAGEDFSYLSGFGNHHSSEALPGALPEGQNSPLICPFGLYAEQISGTPFTSPRNRNRFSWFYRIKPSVTHEPFKPRVPSNRKIFSEFNNSNSSANPTQLRWKPMDAPDSPTDFIDGLSTICGSGSSFMRHGYAIHMYAANKSMDNCAFCNADGDFLIVPQQGRLLITTECGRLKVSPGEIAILPQGFRFSVNLPDGPSRGYVAEIFGTHFELPDLGPIGANGLAAPRDFLVPTAWFEDKSYPGYTIVQKFGGELFAAVQDFSPFNVVAWHGNYFPYKYDLSKFCPYNTVLFDHSDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKADGFLPGGASLHNCMTPHGPDTKSYEATIARGNDIGPSKITDTMAFMFESSLIPRISQWALESPFLDQDYYQCWIGLRSHFNVKTRACEMDTKE 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01677 452 NCBIfam homogentisate 1,2-dioxygenase 10 439 IPR005708 GO:0004411|GO:0006559|GO:0006570
Phco9g01677 452 CDD cupin_HGO_N 103 211 - -
Phco9g01677 452 Pfam Homogentisate 1,2-dioxygenase C-terminal 285 439 IPR046451 -
Phco9g01677 452 Gene3D Jelly Rolls 273 410 IPR014710 -
Phco9g01677 452 PANTHER HOMOGENTISATE 1,2-DIOXYGENASE 8 443 IPR005708 GO:0004411|GO:0006559|GO:0006570
Phco9g01677 452 SUPERFAMILY RmlC-like cupins 9 442 IPR011051 -
Phco9g01677 452 Pfam Homogentisate 1,2-dioxygenase N-terminal 12 284 IPR046452 -
Phco9g01677 452 FunFam Homogentisate 1,2-dioxygenase 273 410 - -