Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01676 ATGGTGAAGATGGAACTCATGAGATGGGTTCCCTGGGTCTTGGTTGTTGTTTTTCTAGTTTTGGTTAATGGGTCATTTTCCTTATACACTCCTCCTGATAGCTATCTAATTGCATGTGGTTCTTCTCAAAACATCACCTTTCAAGGTCGAACTTTTGTTCCCGATTCACAGCATTCTTCACTTGTAATGAAAACTGGGAATTCTTTTGTTGCTAGCACCAATTCTACTGCCCCTTTTCCCATTTACCAATCGGCTCGGGTTTTCACTGAGAAAGCTTCTTATAGGTTTGAGATTCAGCAAGAAGGTAGGCACTGGGTTAGGCTATACTTTTCCCCTATTCCAAACTCTGGCCACAACTTGACTTCAGCTTCTTTAACAGTGGTTACTGATGATTTTGTACTCTTGAGCAACTTCACCTTTAGGAAATACAACGATTCTTATATGTTCAAGGAGTATGCAGTCAATGTTACCTCTGATATATTGCTTGTCACCTTCATTCCTTCCAATGGTTCGGTAGCCTTTGTGAATGGAATTGAAGTTGTGTCAATGCCGAATGAGTTGTTTGTTGATCAGGCACTCGCAGTGAACCCGCCAGCACCATTCAATGGACTTTCTGAACTTGCCTTTGAAACTGTTTATCGCTTGAATATGGGGGGTCCTTTGATTACTTCTGAAAATGACACCCTGGGTAGGAGTTGGGTGAATGATAGGAAGTACCTTCATGTGAACAGCTCTGTCCTTAATGTGTCCGTGAATCCTTCGAGCATTAAGTATCCGGTGGCTGTTAGACCTGAGACGGCCCCAAATTGGGTCTATGCCACTGCTGAAGCAATGGGAGATGCTAATGTAAATGATCCAAATTTCAACATTACTTGGGTCTTCAATGTGGATCCAAATTTCTCCTATTTCATCCGAGCGCACTTTTGTGATATTATGAGCAAGTCACTTAACACTTTAGTGTTCAATATGTTCATAAATTCTAACATAGCTCTTCAGAGCCTTGATCTCTCAACCATGACTAATGACTTGGCTGTGCCTTACTACAAGGACTTTGTTGCCAATGCCTCAGCAGACACTAACACTTTGACTGTGAGTGTCGGTCCAGACCCTGTGGCAGACTTTCCAAATGCCACTATGAATGGGTTGGAGATAATGAAGATCAGCAACTCATTGAAGAGCTTGGATGGGCTTTATTCAGTTCACAGTCTTCTTCCAAGTTCACATTCAAAGAAAAGCATGGTAGGAGTAATTGTTGGTTCTGCTGTTGGGGCCCTAGCTGCTGTAGTGATAGCTGGTTTGTGTTATGGCTGCTTGGTGAGACGCAAATCAAAGTCACTCACTCAACAGGGCCATTCATGGCTGCCTCTGCCCCTTTATGGAAACTCTCTTACCATGACGAAAAATTCAACACTTTCACAGAAGAGTGGAACCGCAAGCTGCATTTCTTTAGCTTCATCAAATCTTGGACGATTCTTCAATTTCCAGGAAATCCTAGATGCTACGAACAAATTTGATGAGAAGCTACTTCTCGGTGTTGGTGGTTTTGGAAGGGTTTACAAAGGAACGCTTGAAGATGGGACAAATGTAGCTGTCAAAAGGGGTAACCCAAGATCTGAGCAAGGCCTTGCAGAATTCCGGACAGAAATTGAAATGTTATCCAAGCTTCGCCATCGCCATCTTGTGTCCCTCATTGGTTATTGTGATGAGAGGTCAGAAATGATTCTTGTCTATGAATACATGGCTAACGGACCCCTCCGGAGTCATTTGTATGGAACAGACCTGCCGCCTCTCTCATGGAAGCAGCGGCTCGAGATCTGCATTGGAGCAGCAAGAGGCCTTCATTATCTCCACACCGGAGCAGCTCAAAGCATAATTCACCGAGATGTAAAGACAACAAATATCCTCTTAGATGAGAACTTTGTTGCCAAAGTTGCTGATTTTGGCCTCTCCAAGACTGGTCCTGCTCTTGATCAGACCCATGTGAGCACTGCTGTTAAGGGTAGTTTTGGTTATCTTGATCCTGAATACTTCAGAAGGCAACAGCTTACTGAAAAATCAGATGTGTATTCATTTGGGGTAGTGTTGATGGAAGTGTTATGCACAAGGCCAGCCTTGAACCCTGTCCTTCCAAGGGAGCAGGTCAACATAGCTGAATGGGCAATGGCCTGGCAGAAAAAGGGTATGCTTGATCAAATCATGGATCAAAATCTTGTTGGCAAGGTGAATCCTGCATCCCTTAAGAAGTTTGGTGAGACAGCCGAGAAGTGCTTGGCCGAGCATGGTGTGGACCGGCCGTCTATGGGAGATGTTTTGTGGAATCTTGAATATGCATTGCAGCTTCAAGAGACATCATCAGCCCTCATGGAGCCCGAAGATAACAGCACAAACCACATAACCGGAATTCAGTTGACACCCCTAGACCATTTTGATAACAGTGTGAGTATGGTTGATGGGGGCAACTCTTGCACAGATGATGATGCAGAAGATGCTGCTACAAGTGCAGTGTTCTCACAATTGGTAAATCCTCGCGGAAGATAA 2538 0.4405 MVKMELMRWVPWVLVVVFLVLVNGSFSLYTPPDSYLIACGSSQNITFQGRTFVPDSQHSSLVMKTGNSFVASTNSTAPFPIYQSARVFTEKASYRFEIQQEGRHWVRLYFSPIPNSGHNLTSASLTVVTDDFVLLSNFTFRKYNDSYMFKEYAVNVTSDILLVTFIPSNGSVAFVNGIEVVSMPNELFVDQALAVNPPAPFNGLSELAFETVYRLNMGGPLITSENDTLGRSWVNDRKYLHVNSSVLNVSVNPSSIKYPVAVRPETAPNWVYATAEAMGDANVNDPNFNITWVFNVDPNFSYFIRAHFCDIMSKSLNTLVFNMFINSNIALQSLDLSTMTNDLAVPYYKDFVANASADTNTLTVSVGPDPVADFPNATMNGLEIMKISNSLKSLDGLYSVHSLLPSSHSKKSMVGVIVGSAVGALAAVVIAGLCYGCLVRRKSKSLTQQGHSWLPLPLYGNSLTMTKNSTLSQKSGTASCISLASSNLGRFFNFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMAWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTPLDHFDNSVSMVDGGNSCTDDDAEDAATSAVFSQLVNPRGR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01676 845 SUPERFAMILY Protein kinase-like (PK-like) 483 775 IPR011009 -
Phco9g01676 845 Pfam Malectin-like domain 37 387 IPR024788 -
Phco9g01676 845 FunFam Putative receptor-like protein kinase 34 184 - -
Phco9g01676 845 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Phco9g01676 845 Gene3D Phosphorylase Kinase; domain 1 463 579 - -
Phco9g01676 845 SMART serkin_6 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01676 845 ProSiteProfiles Protein kinase domain profile. 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01676 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Phco9g01676 845 PANTHER OS07G0166700 PROTEIN 490 781 IPR045272 GO:0004714|GO:0006468
Phco9g01676 845 FunFam receptor-like protein kinase FERONIA 466 579 - -
Phco9g01676 845 Gene3D Transferase(Phosphotransferase) domain 1 580 799 - -
Phco9g01676 845 FunFam Receptor-like protein kinase FERONIA 580 796 - -
Phco9g01676 845 CDD STKc_IRAK 510 775 - -
Phco9g01676 845 Pfam Protein tyrosine and serine/threonine kinase 509 771 IPR001245 GO:0004672|GO:0006468
Phco9g01676 845 FunFam Receptor-like protein kinase FERONIA 208 389 - -
Phco9g01676 845 Gene3D - 34 184 - -
Phco9g01676 845 Gene3D - 207 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01676 Phco-Chr9 39536494 39539031 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco9g01676 Malectin_like 4.5e-38 CL0202