Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01667 ATGGACAGCACCGAAGACTCATCCACCAGTTCACAACAACAACCAAACCTCCCACCCGGGTTTCGGTTCCACCCCACAGACGAAGAGCTCGTGGTTCACTACCTCAAGAAGAAAGTTGATTCTGTTCCTCTCCCTGTTTCAATCATCGCTGATGTTGATCTCTACAAGTTTGATCCATGGGAATTACCAGCTAAGGCATCGTTTGGGGAGGAAGAGTGGTACTTTTTCAGTCCAAGAGATAGGAAGTACCCAAATGGCGCGAGGCCAAACAGGGCTGCAACTTCAGGGTACTGGAAGGCCACTGGGACAGATAAGCCCATATGCAGTGGAATTCAAAAGGTTGGGGTGAAGAAATCTTTGGTTTTCTATGGAGGGAAGCCACCAAAAGGGGTCAAAACCGATTGGATCATGCATGAGTATCGTCTCGCTGAAACCAAGCCTAACAACAGGCCTCCTGGGTGTGACTTGGGCCACAAGAAAAACTCCCTAAGGCTGGATGATTGGGTGTTGTGCCGGATCTACAAGAAGGGCAACACACAAAGGTCACCTATGGACCATGAGAGGGATGATTCCATGGATGACATGATTGGAGAAGTACCTCCTTCCATCAACGTGGGCCACATGAATGCGAGATTTCACCTTTCAAAGATGTCTACGAGCTACAGTGGTGCATTGTTGGAAAATGACAGAAACACGTTAGAAGGGGTGGTTATAGGCAATGGTGTGAATGGGATCAGCACTACTACAAGTGCCATGCCATCTCAGTTTGGCACTTCAAACTCCAAGGCAGTTCACCTTCCTTTTGCCCTTTCAAACAACACTTCAGCCTCCAAAAGAACACTCTCAACACTGTATAACTGGAATGATGATAGTGATGAGAAGCACTTCAATTTGGACTGTAATGGGAATGTGAGTGTTGTGAGGACTGAAGACAACAATGGTACTCCTGGCACCTTTGCTACTCTGCTTAACCATCTCCCACAAACACCTTCATTGCCTCAAATAGGGTCTATGGGAGATGGGTTACTTAGGACACAATATCAAATACAAGGAACTAATTGGTATGGTTAA 1071 0.4659 MDSTEDSSTSSQQQPNLPPGFRFHPTDEELVVHYLKKKVDSVPLPVSIIADVDLYKFDPWELPAKASFGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPICSGIQKVGVKKSLVFYGGKPPKGVKTDWIMHEYRLAETKPNNRPPGCDLGHKKNSLRLDDWVLCRIYKKGNTQRSPMDHERDDSMDDMIGEVPPSINVGHMNARFHLSKMSTSYSGALLENDRNTLEGVVIGNGVNGISTTTSAMPSQFGTSNSKAVHLPFALSNNTSASKRTLSTLYNWNDDSDEKHFNLDCNGNVSVVRTEDNNGTPGTFATLLNHLPQTPSLPQIGSMGDGLLRTQYQIQGTNWYG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01667 356 MobiDBLite consensus disorder prediction 1 22 - -
Phco9g01667 356 Gene3D NAC domain 26 180 IPR036093 GO:0003677|GO:0006355
Phco9g01667 356 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Phco9g01667 356 ProSiteProfiles NAC domain profile. 17 176 IPR003441 GO:0003677|GO:0006355
Phco9g01667 356 FunFam NAC transcription factor 56 26 181 - -
Phco9g01667 356 PANTHER NAC TRANSCRIPTION FACTOR 56 17 217 - -
Phco9g01667 356 MobiDBLite consensus disorder prediction 1 19 - -
Phco9g01667 356 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01667 Phco-Chr9 39339301 39341068 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco9g01667 NAM 2.5e-39 No_clan