Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01664 ATGGGAGTTCCTGTGAGAGACCCTCTTGCACAATTGACTTTGCCTCCTGGATTTAGGTTTTACCCCACTGATGAAGAGCTTCTGGTTCAATACCTATGTCGTAAGGTTGCTGGGCACCATTTTTCTCTTCCAATCATTGCTGAAGTTGATTTGTACAAGTTTGATCCATGGGTTCTTCCAGCTAAGGCTGTGTTTGGAGAAAAAGAATGGTATTTTTTCAGCCCGAGGGATAGGAAGTACCCGAATGGTTCAAGACCAAACAGAGTTGCGGGTTCTGGGTATTGGAAAGCCACCGGAACTGACAAGGTTATCACCACCCAAGGGAGAAAAGTTGGCATAAAAAAAGCACTTGTGTTCTACGTTGGAAAAGCTCCCAAAGGCTCTAAAACCAATTGGATCATGCACGAGTATCGTGTTTTTGACTCTTCTCGCAAAAACAACCTCGGAACCACCAAGCTTGATGATTGGGTTTTGTGTCGTATATACAAGAAGAACTCGAGTTCGCAAAAGGTTGAGGCAAATTTTTGGGCCAAAGAATGCAGCAATGGGTCATCACCTTCTTCATCTTCCCACATGGAAGACAGGGTGGAATCGTTTCCGGAGATCGATGATCAGTGCTTCACTTTTCCGAGTGTGAACTCGCTCAAAACAATGCAACAACAGGACGAGAAATACGGGTTTCAAAACATAGGATCCGAATTTTTTTCTGATTGGGTTACCCCGCCGGATCTTGATTCGATTTCCGAATTCGGGTCGGGTTTCCAAACCCAAGGGATGGTGAATTATGAGTACAATGACTTATTTGTCCCTTCTATGCCGCCGTTCCACATGGAGTTCATGGCAGGGGCACCCAGGGAGGAGGAAGTTCAAAGCAGTGTTAGAACCCAACTGGCTGACGGAGAGGGATATTTTCAGCAGAACCCGAATGCCCGAAATTTGACTGGCTCGAACGAATCGCTTGGATTCGGGTTCATGGATCAGCAAATCACGTTCGGGTTACGGAACTAG 1008 0.4603 MGVPVRDPLAQLTLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEVDLYKFDPWVLPAKAVFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTQGRKVGIKKALVFYVGKAPKGSKTNWIMHEYRVFDSSRKNNLGTTKLDDWVLCRIYKKNSSSQKVEANFWAKECSNGSSPSSSSHMEDRVESFPEIDDQCFTFPSVNSLKTMQQQDEKYGFQNIGSEFFSDWVTPPDLDSISEFGSGFQTQGMVNYEYNDLFVPSMPPFHMEFMAGAPREEEVQSSVRTQLADGEGYFQQNPNARNLTGSNESLGFGFMDQQITFGLRN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01664 335 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Phco9g01664 335 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 211 - -
Phco9g01664 335 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
Phco9g01664 335 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Phco9g01664 335 ProSiteProfiles NAC domain profile. 14 164 IPR003441 GO:0003677|GO:0006355
Phco9g01664 335 FunFam NAC domain-containing protein 72-like 23 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01664 Phco-Chr9 39279209 39280628 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco9g01664 NAM 3.2e-37 No_clan