Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01661 ATGCACATTCTTACTTTCATGATTATGGTTGCATGCATACTTGTTCCCTCTCTCAAAATCTCCATAGCAAATAGTTCTATAAAAGTGTCTCAAGTCCTGAGGGATCAGCAGACATTGGTGTCAAATGGTGGACAGTTTGAACTAGGGTTCTTCAGCCCGGGTAATTCCCAGAAACGTTACCTGGGCCTTTGGTACAGGAATATCCCAGTTCGGAAAGTCCTTTGGGTTGCTAATAGAGCCAACCCCATCAATGATTCATCTGGCATCTTAACACTGAACCCCACAGGAAATCTTGTTCTCACCCAAAAAAATGGATCTGTTGTTTGGCACACCAACACCCTCAAACAAGCACAGAATCCAGTGGCAGTGCTCTTAGACAGTGGCAATCTTCTGATAAGAAACGAAGGAGAAACAAAGACAGAAGAGTATCTGTGGCAAAGCTTTGACTATCCGTCTGACACACTCTTCCCTGGGATGAAGTATGGACGGGACCTCCGAACTAGTCTAGAATGGAGTTATACTGCGTGGAAGAGTCCAGAAGACCCATCCCCAGGAGAGGTTTCGAGGGTCTTAAAACTCTACAACTATCCTGAGTTTTATACCATGAAGGGAACACAAAAGTGGTTCAGGTTTGGACCTTGGAATGGCCTATATTTTAGTGGATCACCAGATCTACAGAACAACACCGTTTTTGGGTTCAATTTTGTCAGTAATAAGGAGGAGATATATTACACCTATAGCCTTGCAAATGATTCTGTCCTCTCCATAAGTGTGATAAACGAAACGGGTACAGTTTCTGGGTACGTGTGGCTGGAGGGTGGCCAAAATTGGAGGGCATGTAGATACCTCCCAAGTGAAATTTGTGACAGCTATGGCCTTTGTGGACCCTATGGGAACTGCGTAACAACCCAATCACAAGTGTGCCAATGTTTGAAAGGTTTCAATCCAAAGTCACCCCTGAAATGGAACTCATCGGATTGGAGTGGAGGATGTGTCCGTAATAAACCGTTAAGTTGCAATGGTACAGACAAAGGTGGGTTTGTGAAATTTGAAGGGCTGAAAGTTCCAGATACTACACATACTTGGTTCGATGAGAGTATCGATCTAAAGGAATGCAGAGTGAAGTGTTTGAATAATTGTTCTTGTATGGCTTATACAAATTCAGACATAAGAAATGGAGGTAGTGGATGTGTCATGTGGTTTGGAGATCTCATTGATATGAGACAGTTTCAAACTGGTAAGCAAGACCTATATATAAGGATGGCTACTTCAGAGATAGAGTCTGTATATAGCCACAACAAGATCAAGACGCTTCCAATAGTTGTTTCCACCGTTGCAGTAGTTTGTGGCGTTCTATTATGTTCCTATTTATTCTGCAGAATTCGGAGGAACAAATCTGAGAAATCATTGTCAGAAGAACACCATGAAAAACAAGTGGATGATCTGGACGTTCAATTGTTTGATCTATTCACAATTGCAACTGCCACTAACGACTTCTCAGCTGAAAATAAGATTGGAGAAGGTGGTTTTGGACCTGTGTACAAGGGAGTATTAACTGATATGCAAGAAATTGCTGTAAAGACTCTCTCAAGGAGCTCATGGCAAGGAGTGACAGAGTTCTTAAATGAAGTAAAATTGATTGCAAAACTTCAGCATCGAAATCTTGTAAAACTTCTTGGTTGTTGCATTCAAGGACAAGAAAAAATGTTAGTTTATGAATTCATGGCAAATGGAAGCCTAGATTCCTTCATATTTGATGATACAAAAAGTAATTTGCTAGAGTGGCCTCAGCGCTTCCACATAATATGTGGAATTGCAAGAGGGCTTATGTATCTTCATCAAGATTCTCGATTGAGGATTATTCATAGAGATCTCAAAGCAAGTAACGTACTTCTTGATAAAAATTTGAGCCCTAAAATATCAGACTTTGGATTGGCCAGAATTTTTGGAGGGGACCAGATTGAAGGAAACACTAGAAGAGTAGTTGGGACTTATGGGTATATGGCACCAGAGTATGCTGTTGATGGATTATTTTCTGTGAAATCAGATGTCTTCAGCTTTGGCATTTTACTGTTGGAGATTGTATGTGGAAAGAAAAATAGAGGATTTTATAACACAGATGAGAGTCTTAACCTAGTTGGTCATGCATGGGCACTATGGAAAAAGGGGAGGGCATTGGAGTTGGTTGATTCCAACAAGATGGAGTCATGTATTATAGCAGAGGTTCTGCGTTGTCTCCATGTTAGTCTTTTGTGTGTGCAGCAGTACCCAGAAGATAGGCCAACAATGGCGTCCGTGATTCTAATGTTGGAGACTCAAATGGAACTGGTTGAGCCCAAAGAACATGGTTTCATTTCGAGAAATGTTTTAGCTGAAGAAGATTTACGGTTAAATTTGATAGACACAAGTTCAAGCAACCATGTAACAATAACCATGTTAGAGGCCCGATAA 2451 0.41 MHILTFMIMVACILVPSLKISIANSSIKVSQVLRDQQTLVSNGGQFELGFFSPGNSQKRYLGLWYRNIPVRKVLWVANRANPINDSSGILTLNPTGNLVLTQKNGSVVWHTNTLKQAQNPVAVLLDSGNLLIRNEGETKTEEYLWQSFDYPSDTLFPGMKYGRDLRTSLEWSYTAWKSPEDPSPGEVSRVLKLYNYPEFYTMKGTQKWFRFGPWNGLYFSGSPDLQNNTVFGFNFVSNKEEIYYTYSLANDSVLSISVINETGTVSGYVWLEGGQNWRACRYLPSEICDSYGLCGPYGNCVTTQSQVCQCLKGFNPKSPLKWNSSDWSGGCVRNKPLSCNGTDKGGFVKFEGLKVPDTTHTWFDESIDLKECRVKCLNNCSCMAYTNSDIRNGGSGCVMWFGDLIDMRQFQTGKQDLYIRMATSEIESVYSHNKIKTLPIVVSTVAVVCGVLLCSYLFCRIRRNKSEKSLSEEHHEKQVDDLDVQLFDLFTIATATNDFSAENKIGEGGFGPVYKGVLTDMQEIAVKTLSRSSWQGVTEFLNEVKLIAKLQHRNLVKLLGCCIQGQEKMLVYEFMANGSLDSFIFDDTKSNLLEWPQRFHIICGIARGLMYLHQDSRLRIIHRDLKASNVLLDKNLSPKISDFGLARIFGGDQIEGNTRRVVGTYGYMAPEYAVDGLFSVKSDVFSFGILLLEIVCGKKNRGFYNTDESLNLVGHAWALWKKGRALELVDSNKMESCIIAEVLRCLHVSLLCVQQYPEDRPTMASVILMLETQMELVEPKEHGFISRNVLAEEDLRLNLIDTSSSNHVTITMLEAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01661 816 Pfam D-mannose binding lectin 73 177 IPR001480 -
Phco9g01661 816 Gene3D Transferase(Phosphotransferase) domain 1 575 808 - -
Phco9g01661 816 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Phco9g01661 816 CDD PAN_AP_plant 336 422 - -
Phco9g01661 816 ProSiteProfiles Protein kinase domain profile. 499 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01661 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 761 - -
Phco9g01661 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Phco9g01661 816 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Phco9g01661 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 462 574 - -
Phco9g01661 816 SMART serkin_6 499 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01661 816 Gene3D - 19 148 IPR036426 -
Phco9g01661 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Phco9g01661 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 421 - -
Phco9g01661 816 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Phco9g01661 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Phco9g01661 816 CDD B_lectin 30 151 IPR001480 -
Phco9g01661 816 SMART ntp_6 342 421 IPR003609 -
Phco9g01661 816 Pfam Protein tyrosine and serine/threonine kinase 501 767 IPR001245 GO:0004672|GO:0006468
Phco9g01661 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Phco9g01661 816 SMART blect_4 30 151 IPR001480 -
Phco9g01661 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Phco9g01661 816 SUPERFAMILY Protein kinase-like (PK-like) 484 772 IPR011009 -
Phco9g01661 816 Pfam PAN-like domain 342 407 IPR003609 -
Phco9g01661 816 CDD STKc_IRAK 505 771 - -
Phco9g01661 816 Gene3D Phosphorylase Kinase; domain 1 472 574 - -
Phco9g01661 816 Gene3D Hepatocyte Growth Factor 339 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01661 Phco-Chr9 39201858 39208315 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01661 PK_Tyr_Ser-Thr 6.1e-51 CL0016