Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01657 ATGGGTACTATTCTTACTTTTGTGATAATATTTGCATGCATACTTGTTCTCTCACTAGAAATTTCCGTAGCGAATGATTCAATCAACATGCTCCAGTCTCTGAGTGATGGGAAGACTTTGGTATCAAAAGGTGGAAAGTTTGAACTTGGGTTTTTCAACCCTGGTAGTTCCCAGAAACGTTACTTGGGAATTTGGTACAAGAATATCCCAGTTAAGACATTTGTTTGGGTTGCTAATGGGGCCAACCCCATCAATGATTCCACAGGCATCTTAACACTGAACACCACAGGCAATCTTGTGCTCACCCAAAATGGTTCTCTTGTTTGGCACACCAACTCTCTCAAACAAGCACAGAATCCGGTGGTAGAAATGTTGGACAGTGGCAATCTTGTGATCAGAAACGAGGGGGAAACAAACCCAGAAGAGTATTTGTGGCAAAGCTTTGACTATCCATCTGATACACTCTTGCCAGGGATGAAGTTAGGATGGGACCTCCGAACTGGTTTGGAACGGAAATATACTGCGTGGAAGAGTCCAGATGATCCATCCCCAGGTGATGTGTCTCGTGTTATGAAACTCTATAGCTATCCCGAGGTTTATATGATGAAGGGTACACAAAAGTTGCTGAGGTATGGACCTTGGAATGGCGAGTATTTCAGCGGAATGCCAGATCTGCTGAATAACACCATTTTTGGCTTGAGTTTTGTCAGCAATGAAGATGAGATTTACTACACCTATACACTCGTGAATGATTCTGTCCTCTCCAGAACTGTAACAAACCAATCAGCTACTATTGTTCGTTATGTATGGCAGGAGGTTGAGAAAATATGGAAAATATATAGATCCTACCCGAAAGAGTTTTGCGACAATTACGACTCCTGTGGACCCAACGGATTATGTGTACGAACTCAGTCACAATCTTGCATATGTTTGAAAGGTTTCAGTCCAAAATCACAACAAAATTGGAACTCATCGGATTGGAGTGGAGGATGTGAGCGCAATAAAGCGTTGGGTTGCAGTGATGATGTGTTTGTACAATTTAAAGGGCTGAAAGTTCCAGCTACTACAGATACTTGGTTGAATAAGAGTATTGGCCTCAAGGAATGCAAAGTGAAGTGTTTGAATAATTGTTCTTGTATGGCCTATACTAATTCAGATATAAGAAATGGAGGTAGTGGTTGTGTCTTGTGGTTTGGAGATCTCATTGACATGAAACAGATTGAAACTGGTGGGCAAGACCTGTATATCAGGATGAATGCTTCGGAGGCAGAATTTGACTATTTTGTTTTTGTAATCAATTCCAACCCTCAAGAACCTGTACCAAGCAACAACAACACACGAACGATAGTCGCTTCAACCGTTGCTGCAATTTCTGGTTTTCTTATTCTTCTAAGTACTTGTATCATTTGCAGGCTCCATAGGAACAATGCTGGAAAATCATCAACCGAAGATAACAACAATAAGAGACATGTGGATGATCTGGACGTCCAAATGTATGATCTTGTAACAATTGCAAATGCCACTAATAACTTCTCCACAGAGAATTTCATAGGAGAAGGTGGTTTTGGACGTGTATACAAGGGAATAATCGACAGCCAAGAAATTGCTGTGAAGACTCTATCAAGGAACTCATGGCAAGGTGTGACAGAGTTCATCAATGAAGTAAACTTGACTGCAAAGCTTCAGCATCGGAATCTTGTTAAACTTCTTGGTTGTTGCATTGAAGGAGAAGAAAGAATGCTCATTTTTCAGTACATGGAAAATGGCAGCCTAGACTCCCTCATTTTTGGTGAGAAAAGCAGTAAATTGCTGGAGTGGCCTCAACGATTCCAAATAACTTGCGGAGTGGCAAGGGGCCTTATGTACCTTCATCAAGATTCACCACTGAGGATCATCCACAGAGATCTCAAAGCTAGTAACATCTTACTCGATAAAACGTTGAATCCGAAAATATCGGATTTTGGAGTATCAAGATCTTTTGGAGTAGACCAATTTGAAGGAAGCACAAGTAGAGTAGTAGGGACCTGTGGGTATATGGCGCCAGAATATGCAGTTGATGGATTCTTTTCTGAAAAATCTGACGTCTTTAGCTTTGGCATTCTGGTGTTGGAGATTATTTGTGGGAAGAGAAATAGAGGACTTTATCAACAGATAAGAGTCTTGAACCTTGTTGCTCATTCATGGACATTATGGAAAGCTGGGAAGGCAATAGATTTGATTGCCTCAAACATGAACATGTCATCGTGCGTTATGTCAGAAGTACTGCGTTGTCTCCATGTCAGTCTTTTGTGTGTGCAACAGAACCCAGATGATAGGCCTACAATGATGTCAGTGATTCTGATGTTGGAGAGTCACATTGAATTGGCTGAGCCCAAAGAACCTGCTTTCATTTCTAGAAATGTGTTACCTGAAGAAGATTTATATCCGAAAGACACGAGTTCAACCAACGAAGTCACCGTTACCATTTTAGAACCTCGATGA 2481 0.4115 MGTILTFVIIFACILVLSLEISVANDSINMLQSLSDGKTLVSKGGKFELGFFNPGSSQKRYLGIWYKNIPVKTFVWVANGANPINDSTGILTLNTTGNLVLTQNGSLVWHTNSLKQAQNPVVEMLDSGNLVIRNEGETNPEEYLWQSFDYPSDTLLPGMKLGWDLRTGLERKYTAWKSPDDPSPGDVSRVMKLYSYPEVYMMKGTQKLLRYGPWNGEYFSGMPDLLNNTIFGLSFVSNEDEIYYTYTLVNDSVLSRTVTNQSATIVRYVWQEVEKIWKIYRSYPKEFCDNYDSCGPNGLCVRTQSQSCICLKGFSPKSQQNWNSSDWSGGCERNKALGCSDDVFVQFKGLKVPATTDTWLNKSIGLKECKVKCLNNCSCMAYTNSDIRNGGSGCVLWFGDLIDMKQIETGGQDLYIRMNASEAEFDYFVFVINSNPQEPVPSNNNTRTIVASTVAAISGFLILLSTCIICRLHRNNAGKSSTEDNNNKRHVDDLDVQMYDLVTIANATNNFSTENFIGEGGFGRVYKGIIDSQEIAVKTLSRNSWQGVTEFINEVNLTAKLQHRNLVKLLGCCIEGEERMLIFQYMENGSLDSLIFGEKSSKLLEWPQRFQITCGVARGLMYLHQDSPLRIIHRDLKASNILLDKTLNPKISDFGVSRSFGVDQFEGSTSRVVGTCGYMAPEYAVDGFFSEKSDVFSFGILVLEIICGKRNRGLYQQIRVLNLVAHSWTLWKAGKAIDLIASNMNMSSCVMSEVLRCLHVSLLCVQQNPDDRPTMMSVILMLESHIELAEPKEPAFISRNVLPEEDLYPKDTSSTNEVTVTILEPR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01657 826 CDD B_lectin 32 151 IPR001480 -
Phco9g01657 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Phco9g01657 826 ProSiteProfiles Protein kinase domain profile. 511 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01657 826 Pfam PAN-like domain 339 404 IPR003609 -
Phco9g01657 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 586 790 - -
Phco9g01657 826 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Phco9g01657 826 SUPERFAMILY Protein kinase-like (PK-like) 496 783 IPR011009 -
Phco9g01657 826 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Phco9g01657 826 Pfam Protein tyrosine and serine/threonine kinase 514 779 IPR001245 GO:0004672|GO:0006468
Phco9g01657 826 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 773 - -
Phco9g01657 826 Gene3D - 20 148 IPR036426 -
Phco9g01657 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 475 585 - -
Phco9g01657 826 Gene3D Phosphorylase Kinase; domain 1 484 585 - -
Phco9g01657 826 SMART serkin_6 511 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01657 826 SMART blect_4 31 151 IPR001480 -
Phco9g01657 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 148 - -
Phco9g01657 826 CDD PAN_AP_plant 331 417 - -
Phco9g01657 826 PIRSF SRK 1 826 IPR024171 GO:0004674
Phco9g01657 826 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Phco9g01657 826 Pfam D-mannose binding lectin 73 177 IPR001480 -
Phco9g01657 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Phco9g01657 826 SMART ntp_6 339 418 IPR003609 -
Phco9g01657 826 ProSitePatterns Protein kinases ATP-binding region signature. 517 538 IPR017441 GO:0005524
Phco9g01657 826 Gene3D Transferase(Phosphotransferase) domain 1 586 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01657 Phco-Chr9 39182284 39186503 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01657 PK_Tyr_Ser-Thr 6.2e-48 CL0016