Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01640 ATGTCTAACGGAAGCTTATCACTTCCAACTTCTGCCAATGGTGCAAAACCTCCCTTCACTCGACCCACTGCAAATTTTCATCCTTCCGTTTGGGGCGATCGCTTCCTTTCCTACGTTCCTACTTCCGCTGTATATCATTTTGCATTTTCAATCTCTTTAGCCAAGATGTTACATTTGCATCATGGATACCGTATTTCTTCAGGTATATTTTGCAAATTCCAATACCAAACCGGAAAGCTTAAGGAAAGTTTAGCTGATGATATTCAAGGAATGTTAAGCTTGTATGAAGCAGCAGAACTAAGATGTCATGGAGAAGATGTGCTTGAAGAAGCACATAAGTTCAGTTTCGAGCAGTTAACGAAGTTTATAACTACCCAATTAAGTTGTTCTCATGTGGCACGAGTGCAACATAGCTTAAAACAATCACTTCGCAGAGGTTTGCCTAGGTTGGAGGCCACATATTATATGTCTTTCTACGAGGAAGATCCATCTCATGATGAAAAATTGTTAACATTTGCAAAATTAGATTTTAATATGCTACAAGAGCTACATTTGAAAGAAGTCAACACTCTAACCAAATGGTGGACTAAGGATTTAAATGTCTCAACCAATTTACCTTTTACACGAGATAGGATCGTAGAATGTTATTTTTGGATTTTGGGGGTCTATTTTGAACCACAGTATTCTAGATGGATAACAACAAAAGCAATAGGTCTAGCTTCCATCATTGATGACCTCTATGATGCTTACGGAACCATTGAAGAACTTGAGCTTTTCACCAGTGCAATTGAGAGGTGGGATATTTGTTGCTTGGTTGATCTCCCAAAATACATGCAATTATGTTATAAGGCAATTTTGGATGTTTATGAAGAAATTGAGAAAGAAATGAGAAAGCAAGGAAAAGTATATTTCATGAAGTATGCTAAGAAAGAGATGAAAAGACTAGTCCAGGCTCACATGGCTGAGGCAAGATGGTGTCATACCAACCACATTCCAACAATAGAGGAGTACATGGAAGTAAGAGGAATGTCAGCTGGTTACTCTTTCTTAATTACCTTATCTTTCCTAGGCATGGAAGATACAACAGAGGAGGTTCTTATATGGGCAACGAATGAACCAATAATTATTGCAGCATCTACAACTATATGCAGAATCATGGATGACATTGTTGGAGATGAGTTTGAACAACAGAGAGAACATGTTGTCTCAAGCATTTACTGCTATATGAAGCAGCATAAAGTTTCAAGGAAATGTGCCATTGAAGAATTACAAAAGTTAGTTGAGAATGCTTGGAAGGACATAAATGATGCATGCTTAGCTCCTACTCAAGTACCAATGACTTTTCTTTTGCGTGTAGTCAACTTTGCACGTGTGATCGACATGCATTACAAGGATGAAGATAACTATACAAATGCAAGAGGAATAATGAAAGATCACATTGAATCTTTATTAGTTAAAAAGATGTTCATATAA 1473 0.372 MSNGSLSLPTSANGAKPPFTRPTANFHPSVWGDRFLSYVPTSAVYHFAFSISLAKMLHLHHGYRISSGIFCKFQYQTGKLKESLADDIQGMLSLYEAAELRCHGEDVLEEAHKFSFEQLTKFITTQLSCSHVARVQHSLKQSLRRGLPRLEATYYMSFYEEDPSHDEKLLTFAKLDFNMLQELHLKEVNTLTKWWTKDLNVSTNLPFTRDRIVECYFWILGVYFEPQYSRWITTKAIGLASIIDDLYDAYGTIEELELFTSAIERWDICCLVDLPKYMQLCYKAILDVYEEIEKEMRKQGKVYFMKYAKKEMKRLVQAHMAEARWCHTNHIPTIEEYMEVRGMSAGYSFLITLSFLGMEDTTEEVLIWATNEPIIIAASTTICRIMDDIVGDEFEQQREHVVSSIYCYMKQHKVSRKCAIEELQKLVENAWKDINDACLAPTQVPMTFLLRVVNFARVIDMHYKDEDNYTNARGIMKDHIESLLVKKMFI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01640 490 SUPERFAMILY Terpenoid synthases 165 487 IPR008949 -
Phco9g01640 490 MobiDBLite consensus disorder prediction 1 20 - -
Phco9g01640 490 Pfam Terpene synthase family, metal binding domain 170 433 IPR005630 GO:0000287|GO:0010333|GO:0016829
Phco9g01640 490 SFLD Terpene Cyclase Like 1 C Terminal Domain 166 488 IPR034741 -
Phco9g01640 490 Gene3D - 45 161 IPR036965 GO:0010333|GO:0016829
Phco9g01640 490 SFLD Isoprenoid Synthase Type I 166 488 - -
Phco9g01640 490 PANTHER OS04G0344100 PROTEIN-RELATED 52 471 - -
Phco9g01640 490 Gene3D Farnesyl Diphosphate Synthase 24 488 IPR008949 -
Phco9g01640 490 FunFam Isoprene synthase, chloroplastic 134 478 - -
Phco9g01640 490 MobiDBLite consensus disorder prediction 1 18 - -
Phco9g01640 490 CDD Terpene_cyclase_plant_C1 21 485 IPR044814 GO:0010333|GO:0016102
Phco9g01640 490 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 165 IPR008930 -
Phco9g01640 490 Pfam Terpene synthase, N-terminal domain 59 139 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01640 Phco-Chr9 38721428 38726442 Dispersed/Tandem