Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01639 ATGTCTAACGGAAGCTTATCACTTCCAACTTCTGCCAATGGTGCAAAACCTCCCTTCACTCGACCCACTGCAAATTTTCATCCTTCCGTTTGGGGCGATCGCTTCCTTTCCTACGTTCCTACTTCCGCTGAAAGTGATAGCCACATTCAACAAGCTAAACTATTAAAAGAGGACGTGAGGAAGAGCCTTGTCTCACCTATTGATCATAACAATTTCTCTTTTAAATTGAACTTCATTGATTCAGTCCAACGTTTGGGTGTCTCTTACCATTTTGAGCACGAAATTGACACTCTTCTATGTCAAATTTATAACATTTCAACAAAGGACAATAATATCATAGCTCATAGTGATCATCTTTACCATACGGCTCTACTCTTTAGGTTGCTTAGACAGCATGGATACCGCATTTCTTCAGGTATATTTTGCAAATTCCTAGACCAAACCGGAAAGTTTAAGGAAAGTTTAGCTGATGATATTCAAGGAATGTTAAGCTTGTATGAAGCAGCAGGACTAAGATGTCATGGAGAAGATATGCTTGAAGAAGCACATAAGTTCAGTTTTGAGCAGTTAACGAAGTTTATAACCATCCAATTAAGTTGTTCTCATACGACACGAGTGCAACATAGTTTAAAACAATCACTTCGTAGAGGTTTGCCTAGGTTGGAGGCGACATATTATATGTCTTTCTACGAAGAAGATCCATCTCATGATGAAAAATTGTTAACATTTGCAAAACTAGATTTTAATATGCTACAAGAGCTACATTTGAAAGAAGTCAGTAGTCTAACCAAATGGTGGACTAAGGATTTAAATGTCTTAACCAATTTACCTTTTACACGAGATAGGATCGTAGAATGTTGTTTTTGGATTTTGGGGGTCTACTTTGAGCCACAATATTCTAGATGGATAACAACAAAAGGAACAGCTCTAGGTTCCATCATTGATGACCTCTATGATGCTTATGGAACCATTGAAGAACTTGAGCTTTTCACCAGTGCAATTGAGAGACTAGTCCAGGCTCACATGGCTGAGGCAAGATGGTGTTATACCAACCACATTCCAACAATGGAAGAGTACATGGAAGTAAGAGGAATCTCAAGTGGTTACCCTTTCTTGATGACCTTATCTTTCCTGGGAATGGAAGATACAACGGAGGAGGTCCTTATATGGGCAACAAATGAACCAGTAATTATTGCAGCTTCTACCGCTATAGCTAGAATCATGGATGACATTGTTGGAGATGAAAGAGAACATGTTGTTTCAAGCATTTACTGCTATATGAAGCAGCATAAAGTGTCAAGGAAATGTGCCATTGAAGAACTACAAAAGTTAGTTGAGAATGCTTGGAAAGACATAAATGATGCATGCTTAGCTCCTACTCAAGTACCAATGACTTTTCTTATACGTGCAGTCAACTTTGCACGTGTGATCGACGTGCTTTACAAAGATGAAGATAACTATACAAATGCAGGAGGGATAATGAAAGATCATATTGAATCTTTATTAGTAAAAAAGATGTCCCTATAA 1527 0.3811 MSNGSLSLPTSANGAKPPFTRPTANFHPSVWGDRFLSYVPTSAESDSHIQQAKLLKEDVRKSLVSPIDHNNFSFKLNFIDSVQRLGVSYHFEHEIDTLLCQIYNISTKDNNIIAHSDHLYHTALLFRLLRQHGYRISSGIFCKFLDQTGKFKESLADDIQGMLSLYEAAGLRCHGEDMLEEAHKFSFEQLTKFITIQLSCSHTTRVQHSLKQSLRRGLPRLEATYYMSFYEEDPSHDEKLLTFAKLDFNMLQELHLKEVSSLTKWWTKDLNVLTNLPFTRDRIVECCFWILGVYFEPQYSRWITTKGTALGSIIDDLYDAYGTIEELELFTSAIERLVQAHMAEARWCYTNHIPTMEEYMEVRGISSGYPFLMTLSFLGMEDTTEEVLIWATNEPVIIAASTAIARIMDDIVGDEREHVVSSIYCYMKQHKVSRKCAIEELQKLVENAWKDINDACLAPTQVPMTFLIRAVNFARVIDVLYKDEDNYTNAGGIMKDHIESLLVKKMSL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01639 508 Coils Coil 503 508 - -
Phco9g01639 508 Pfam Terpene synthase, N-terminal domain 31 210 IPR001906 GO:0010333|GO:0016829
Phco9g01639 508 FunFam Isoprene synthase, chloroplastic 70 236 - -
Phco9g01639 508 PANTHER OS04G0344100 PROTEIN-RELATED 21 336 - -
Phco9g01639 508 SUPERFAMILY Terpenoid synthases 236 506 IPR008949 -
Phco9g01639 508 Gene3D Farnesyl Diphosphate Synthase 337 506 IPR008949 -
Phco9g01639 508 CDD Terpene_cyclase_plant_C1 21 503 IPR044814 GO:0010333|GO:0016102
Phco9g01639 508 MobiDBLite consensus disorder prediction 1 21 - -
Phco9g01639 508 Pfam Terpene synthase family, metal binding domain 241 337 IPR005630 GO:0000287|GO:0010333|GO:0016829
Phco9g01639 508 Gene3D - 70 236 IPR036965 GO:0010333|GO:0016829
Phco9g01639 508 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 236 IPR008930 -
Phco9g01639 508 MobiDBLite consensus disorder prediction 1 18 - -
Phco9g01639 508 Gene3D Farnesyl Diphosphate Synthase 28 336 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01639 Phco-Chr9 38650501 38655915 Dispersed/Proximal