Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01626 ATGGACTTGAATGAGTTTTTAAGTGTCGGTGTGACTAGTTCGACAGGAATCCCTTGCACATCATCTTATACTCCTATTTCATCAATACCCAACAGGTTGCTTGGATCCTTGAAACACGACACAGAATACTCTCCTAATTCGGCCCTTTCTACTCATTTTGATTCTGATGCTCTTTCTTCTGCACTAAGTGACGGCCAGGAACAGAACACCGGTGGGGAAATTCACTCTGGTGTAAACCCTTTGCAGGAAAGCAATCATTATTTGTATAGGCCAGTCTCATCTGTGGACCATCTCCAAGACGGCATGCAACTATCTACTAGATGCTTTTTTCCACAGGATATAGGTTATGACCATGAGACTAGATATGCATTGCAGGAATTAGAAACTGCTTTGATGGCACCTGATGGTGATGATCAAGTCACCACATCAAGCACTTCTTTGGGTGTTAGCAGAAGGCCTACAACATCTGGCCAGAGAAATAGGTCCTGGAGCCATGAGGGTCAGCCAAGTGTTGTTGCACGTGTAGGTAAGCGTCACAAAACAACCGAGGAAGTATCACTACAAGGATTCCCTCCAACCAGTTTGAAACAATGGCTGATTGTATCTGCCAAAGCCTTGTCTGAAAACAACATAAAAGATTTTGATCAATTGATAGAAAAGGCTAGAAGTGTTGTGTCTATAACTGGGGAGCCAATCCAGCGCCTTGGTGCTTATTTGGTGGAAGGGCTTGTTGCAAGGAAGGAGGCATCGGGGAATAACATCTACCATGCCCTTAGATGCAGAGAACCTGATGGAAAAGACTTGCTCTCTTACATGCAGCTTCTGTATGAAATATGTCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGCGCCATTGCTGAAGCTTGTAGAGATGAGGACCACATTCATATCATAGACTTTCAGATTGGTCAGGGAATTCAATGGATGACACTTCTTCAAGCTCTTGCAGCAAGACCTGGTGGAGCTCCTCATGTGCGGATCACAGGGATTGATGATCCCCTTTCTAAATATGTTCGTGGTGATGGATTAGAAGCCGTTGGAAAAAGGTTGGCTGAAATATCTCAGACATTTAACATCCCAGTTGAGTTCCACAGTGTGCCTGTTTTAGCTCCATATGTGACAGAAGACATGCTTGACATTAGGCCTGGTGAGGCTTTGGCTGTGAATTTCTCTTTGCAACTCCACCACACGGCTGATGAGAGTGTCGATATGAGCAATCCAAGGGATGGACTTTTGAGATTGGTGAAATCACTTTCTCCCAAGGTAACTACGTTGATTGAGCAAGAGTCAAACACTAATACCACTCCTTTCTTCAACAGGTTTATAGAAACCTTGGATTACTACTTGGCAATTTTTGAGTCCATTGATGTGTCTCTTGCAAGAAAGAGCAAGGATCGAATTAATGTGGAACAACACTGTCTGGCACGGGATATTGTCAATATTATTGCTTGTGAAGGGAAGGAAAGGGTAGAGAGACATGAACTGTTAGGCAAGTGGAAGTCTAGGTTGACAATGGCTGGCTTTTCTCAATATCCTTTGAGTTCATACGTAAATTCTGTCATAAGGAGCCTGCTTAGGTGCTATTCAGAACATTATAATCTTGTGGAGAAGGATGGGGCCATGTTGTTGGGATGGAAGGACAGAAATTTGATTTCAGCTTCAGCATGGCATTGA 1698 0.4346 MDLNEFLSVGVTSSTGIPCTSSYTPISSIPNRLLGSLKHDTEYSPNSALSTHFDSDALSSALSDGQEQNTGGEIHSGVNPLQESNHYLYRPVSSVDHLQDGMQLSTRCFFPQDIGYDHETRYALQELETALMAPDGDDQVTTSSTSLGVSRRPTTSGQRNRSWSHEGQPSVVARVGKRHKTTEEVSLQGFPPTSLKQWLIVSAKALSENNIKDFDQLIEKARSVVSITGEPIQRLGAYLVEGLVARKEASGNNIYHALRCREPDGKDLLSYMQLLYEICPYLKFGYMAANGAIAEACRDEDHIHIIDFQIGQGIQWMTLLQALAARPGGAPHVRITGIDDPLSKYVRGDGLEAVGKRLAEISQTFNIPVEFHSVPVLAPYVTEDMLDIRPGEALAVNFSLQLHHTADESVDMSNPRDGLLRLVKSLSPKVTTLIEQESNTNTTPFFNRFIETLDYYLAIFESIDVSLARKSKDRINVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFSQYPLSSYVNSVIRSLLRCYSEHYNLVEKDGAMLLGWKDRNLISASAWH 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01626 565 ProSiteProfiles GRAS family profile. 186 565 IPR005202 -
Phco9g01626 565 MobiDBLite consensus disorder prediction 133 168 - -
Phco9g01626 565 Pfam GRAS domain family 196 564 IPR005202 -
Phco9g01626 565 MobiDBLite consensus disorder prediction 58 79 - -
Phco9g01626 565 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 150 561 IPR005202 -
Phco9g01626 565 MobiDBLite consensus disorder prediction 136 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01626 Phco-Chr9 38186736 38188433 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco9g01626 GRAS 4.8e-125 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01626 9 38186736 38188433 Phco9g01626 9 38186736 38188433 ECH
Phco10g01013 10 30600451 30602196 Phco9g01626 9 38186736 38188433 PCT