Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01625 ATGAGAGAGGAGTCAATAGGGCTGATTATTGGGGTTTCCATAGGGGTGGTTATTGGACTAATTTTGGCAATTTTTGCATTCTTCTGCCATAGGTATCATCGGAAGCGTTCACAGATAGGCAATAGCAGTTCTAGAAGGGCAGCTACCATTCCAATACGCACACATGGTGCTGATTCTTGCACCATTCTATCAGACTCAACCTTAGGTCCAGAATCACCCATAAAGTCAGGAAGGTATGGCATGCCCTTCTGGCTTGAGGGGTTTAAGAAGAGTAGTAACATGGTCCCAGCATCTGGCCTACCTGAATATGCATACAAGGATTTGCAGAAAGCAACACATAATTTTACAACAGTCATAGGACAAGGTGCGTTTGGTCCTGTTTATAAAGCTCAGATGTCTACTGGTGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTCACACAGAGGTCATGTTGCTGGGAAGGTTACACCATAGAAATCTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGGCAACATATGCTTGTATATGTATACATGAGTAATGGTAGCTTGGCATCCCACTTGTACGGTAGTGATGTGAATGAAGCACTGTGCTGGGATCTGAGGGTTCACATAGCTTTAGATGTGGCAAGAGGCTTGGAGTATCTTCATGATGGGGCAGTTCCCCCTGTAATCCATCGAGACATCAAATCTTCCAATATTCTGTTGGATCAATCCATGCGAGCTAGGGTTTCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGATAAACATGCAGCTATTCGGGGTACCTTTGGCTATCTTGACCCTGAGTATATATCTTCAGGAACATTCACCAAGAAAAGTGATGTATACAGTTTTGGAGTGTTGCTCTTTGAAATTATAGCTGGCAGAAACCCTCAACAGGGTCTTATGGAATATGTTGAGCTTGCAGCAATGAACATCGAGGGAAAAGTTGGGTGGGAGGAGATTGTGGATTCTCACCTTCAAGGAAACTTTGATGTGAAGGAACTCAATGAAGTTGCAGCACTAGCCTACAAATGCATCAACCGTGCCCCAAATAAACGTCCTTCTATGAGGGATATTGTGCAAGTGCTAACAAGAATCCTTAAATCAAGGCACCATGGGAATCATCACAAAAATTCCTTGTCAGCCACAGATGAAGTTTTCATTGATCCTGATCAGCTAGAGACCATGATTTCAGTCACTGACCACAGGAGAGAAGAATCTAAGGATAATGCAAGAGAGGTGTATGATGAGTACAATGTTGTTTCATCTTAA 1311 0.4264 MREESIGLIIGVSIGVVIGLILAIFAFFCHRYHRKRSQIGNSSSRRAATIPIRTHGADSCTILSDSTLGPESPIKSGRYGMPFWLEGFKKSSNMVPASGLPEYAYKDLQKATHNFTTVIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSNGSLASHLYGSDVNEALCWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVSDFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFEIIAGRNPQQGLMEYVELAAMNIEGKVGWEEIVDSHLQGNFDVKELNEVAALAYKCINRAPNKRPSMRDIVQVLTRILKSRHHGNHHKNSLSATDEVFIDPDQLETMISVTDHRREESKDNAREVYDEYNVVSS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01625 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Phco9g01625 436 FunFam calcium/calmodulin-regulated receptor-like kinase 1 189 397 - -
Phco9g01625 436 SMART serkin_6 113 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01625 436 Gene3D Transferase(Phosphotransferase) domain 1 189 401 - -
Phco9g01625 436 Gene3D Phosphorylase Kinase; domain 1 86 188 - -
Phco9g01625 436 ProSiteProfiles Protein kinase domain profile. 113 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01625 436 Pfam Protein tyrosine and serine/threonine kinase 115 376 IPR001245 GO:0004672|GO:0006468
Phco9g01625 436 SUPERFAMILY Protein kinase-like (PK-like) 91 376 IPR011009 -
Phco9g01625 436 CDD STKc_IRAK 119 379 - -
Phco9g01625 436 PANTHER OS01G0750732 PROTEIN 5 393 - -
Phco9g01625 436 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 86 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01625 Phco-Chr9 38146787 38150067 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Phco9g01625 PK_Tyr_Ser-Thr 1.3e-52 CL0016