Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01621 ATGGAGAAGGAAGAAAAGAAGAAGACAAAGGGAAGCATTAAGGATAATATGCCAACGGTTTGGTTCTCTCTGAAGAAGTCTTTACACTGCAAATCTGAACCATCTGATGTTCATGACCCCAAAACAAGGAAGCACTTGAGCACAATCTTGACCAAGAGAGCAGGGAGGTCAGGGTGTTCTAGGTCCATAGCAAATCTCAAGGATGTAATCCATGGAAGCAAGAGGCATCTTGATAAGCCACCAAGTTGCAGTCCAAGATCCATAGGGAGCAGTGAGTTCCTCAACCCCATAACTCATGAGGTGATTTTAAGCAACTCAAGGTGTGAGCTGAAGATAACTGGGTATGGAGGCTTCCAAGAAGGGGTTGGCAGTGGTGGCAGCAATGCTGGTGGAGGTAGTGGTGGTTCAACTTTTGTGGGGACTTTGAGGCCAGGGACTCCTGGCCCTGGAGGGCACCCTACAATGCACTACTTTAATCCTTCTTTTAGGACCTCATCCACTCCTCCAAGGAAATCTCCTTTCCTCTTATCAGATAAAGAAGGGTCTGGTCCTCCAGGGCTTCAACCTAGCACTAGGTTGTCTCATGAGACAGATTCTAACGGGTCTTCAACTGTGACTTGCCACAAATGTGGAGAGCAATTCAACAAGTGGGATGCTGCTGAAGCTCATCATCTGTCTAAGCATGCTGTGACTGAACTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATCATATGCAGGACTAGCTGGCTAAAGTCTGAAAACCAGTGTGGTAGAATTGAACGAGTTTTGAAGGTGCACAACATGCAAAAGACTCTTGCAAGATTTGAAGAGTACAGGGAGATGGTGAAGATCAAAGCCAGCAAGCTCCAGAAGAAGCATCCAAGATGTCTGGCTGATGGAAATGAGCTTTTGAGGTTTTATGGCACTACTGTGGCATGCTCTCTTGGCCTTAATGGCTCTTCTAGTCTCTGCCTATCAGAAAAGTGCTGTGTTTGCAGAATCATAAGGAATGGCTTTTCAGCAAAGAAAGAGCTCAAGGGTGGCATTGGAGTCTTCACAACATCCACAAGTGGAAGGGCTTTTGAGTCCATAGAGATTTTTGGCGATGAACCATCACTGAGAAAAGCACTCATAGTATGCAGAGTAATTGCTGGCAGGGTTCATAGGCCACTAGAAAACATTCAAGAAATGGCAGCACAAACAGGATTTGATTCATTGGCTGGGAAAGTTGGTCTATATTCAAACATTGAGGAGCTTTACTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTGATTTGCAAACCTTGA 1320 0.4523 MEKEEKKKTKGSIKDNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVGSGGSNAGGGSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSDKEGSGPPGLQPSTRLSHETDSNGSSTVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEIFGDEPSLRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01621 439 MobiDBLite consensus disorder prediction 158 172 - -
Phco9g01621 439 MobiDBLite consensus disorder prediction 187 204 - -
Phco9g01621 439 MobiDBLite consensus disorder prediction 126 204 - -
Phco9g01621 439 FunFam C2H2-like zinc finger protein 229 438 - -
Phco9g01621 439 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 20 437 - -
Phco9g01621 439 Gene3D - 219 438 - -
Phco9g01621 439 SUPERFAMILY ADP-ribosylation 230 438 - -
Phco9g01621 439 ProSitePatterns Zinc finger C2H2 type domain signature. 207 228 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01621 Phco-Chr9 38036324 38038222 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco9g01621 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01621 9 38036324 38038222 Phco9g01621 9 38036324 38038222 ECH