Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01598 ATGCGCGCCCCCACCGTAAGAAACCTATGTACTCTCAGCGCCCTCTTCCGCTCTCGGTTAACCCGCAACCCCAACACCAAAGTTGAAACATTTAGAAAATCTTCTCCTGAATTCGAAGTGGGTTTTGGTTCTGAACTGCAACACTCCTCAGAGTTCGACCTTCCTCGTAACTCTTCCCGAGGGGATTTGGTCGACGACGATTGTAATACTGCTGAGCTCTCTGCTTTACTGTGCTCTAAACAGGACAAGGGGTCTGGTTATGATGAGGTCGATCACGAAGAAAAAAGGAAAAGTGCAGTAGAAATGCCATGGTTTCCAGACATGTGTCATGGTAAATTATCGGGCAAACGAAAGGTGGTAGTGCGTGAGCGGAAGCAGAAGTGGATTTTTAAATACTCAAGTGAGGACCGTTTCGACAGGTTAATTAAATTTTGTGCAGATAAACTAGGAGCAGCAAAGACAGTTAATGTGTTTGGTCACTTGGGTCGGGAAACAGGCGTCAAGGAGTACAATGCACTGATAAAAATGTGCGTACAGAAGGCTAGGGTGACTGATGATGAATACATTGCTCTAAGTGAAATGAGTAAGGCTTTTCACCTTTTCAAATCAATGAGGGATTGTGGATATCCACTTGAAGAGCGAACATATGATCCAGTTCTTCGGTATATAATTGATACGGGTTTGGTTCAAGAATTTCAACTTTTCTCTGATATTATCAAAGCTGAGAATTCTGGTTCAGCTTCACGATTGGGTTACTATGAAATGTTGCTGTGGTTAAGAGTTGACAATGAAGAAATGATCCGGGACATTTGTGAGTTTATTACAGTCGATGATAGAGAAGACACTTCTGCCTTACGAGTAAGTTACTTGATGGCTCTTTGTGAAAGTGATCGGAAGATGCAACTTTTGGATGTGGTGAAGAATATAGACATCATCAAGCTTTTACCAGCAGAATCTATTGAAAATATATTCCAATCATTAGGCAGGCTCCAGCTGGAATCTGTTGCAGAGGATATACTTTTGGATTTGAGAGCACGTGATCGTGATGCAGATAATATTTCAAACTTCATTGTTAGTTATGCTGTTAGCATTCCAAATTTAGCGGTTGAAGACATCATCCCAAAAGTCAATAATATGCACGGAATACTGGAAGTGCTGCCTTCATTATCATCATATGAGAAGCTCATTTTGCATTTCTGTGGTTTAGACAAGGTGGGCGATGCTCTAGATATCGTTGAACAAATGTGTAACGCTGGCTTTTACTTGTCAACTGACGTGTTACAATTCATCTTACAAATATGTGAGGAATCTTATGAATATATTTTGGTCCATCGAATCCATTCCATAATATGTCGCTATCAGTTGAAGTTGAATGGGGAAATAGGCAGGTGCTTGGTACACTTTTGCGTGAGGATGAAAGATTTTGAAGGTGCATACAAGATAATTGGTGACTTAGAGGAAATGAATTTCAAACCTACGACAAACATGTACAATGCTATAATGGCAGGATATTTTCGAGAGAAGAACATCAGTGGTGGGTTGAGGGTCCTCAAGCACATGCAAGGTGCCAATGTAACGCCTGATTCTCAGACTTTCTGCTATTTGATTCACAATTGTGAAACGGAAGAGGATATAATGAAGTATTGTGAAGAAATGAAACAACATGGAATTTTTGCTACAAAACAAGTTTTAATGGCCCTTGTTAATTCATATGCAGCTTGTGGAAAATTGGAGAAGGCAAAACAGGTAGTTTTGGATCCAAACATACCAATCAATAGCTTAATTGAAATCAAGAGTGTACTTGTTGTAGCTCTTGCATCACATGGGCAATTGTCTGAGGCTCTTCTTGTCTATGAACAAATTAAGAAAGCTGGACATAACTTGGAGCCAAAAGCTGCTACCTGTTTGATTGAAGAGTTGACCCAACATTATGGGGAGTTGGATAAATTGCTACTTCTACTCAAGGAAGTGAGTGATCTAGACTATTGGGTTGATGGCTGCTTCAGGGTCATCTTGTACTGTGCACGAAACAAGAATTTGAGTTCTGCTATTCTTTTGTTCAAACAACTCAAGGATAAGTTTGAAAATGATGAAATGGTAATGGAAGCCCTTTTTGATGCAGTATTTTCTGCAATTGCAGAATCTGAGTCCACTCATTTACAGATTGGCCTGGACTTGCTTTGGGCAATCAAGGATGAACTGGACCTTATGCCGTCACGGCAGTGTCTTGATTTTCTTCTGAGTGCTTGTGCCAAAGCTAGAGATTTGAACAATGCTCGCTTGATTTGGAGAGAGTACGAAATTGCTGGGTTTCCTTACAATGTATTAAGTTACTTGCGAATGTATCAGGCACTTTTGGCAGCAGGAGATGGTAAATCAGCAAGCTTAATGCTTAAGAAAATTCCAGGGGACGATGCAGAGGTTTGTTCTGTCATAATAGCATGTCAGGAAACATACAGTGCTGTTGATTCTGTAGGAGAGAAGAAAAAGCAGGGAAAAAGTAAAGGAAGAAAGAGCAAAGACCTGAATACTAGTTCCACTGATATGTGTAGTGTATGA 2559 0.4037 MRAPTVRNLCTLSALFRSRLTRNPNTKVETFRKSSPEFEVGFGSELQHSSEFDLPRNSSRGDLVDDDCNTAELSALLCSKQDKGSGYDEVDHEEKRKSAVEMPWFPDMCHGKLSGKRKVVVRERKQKWIFKYSSEDRFDRLIKFCADKLGAAKTVNVFGHLGRETGVKEYNALIKMCVQKARVTDDEYIALSEMSKAFHLFKSMRDCGYPLEERTYDPVLRYIIDTGLVQEFQLFSDIIKAENSGSASRLGYYEMLLWLRVDNEEMIRDICEFITVDDREDTSALRVSYLMALCESDRKMQLLDVVKNIDIIKLLPAESIENIFQSLGRLQLESVAEDILLDLRARDRDADNISNFIVSYAVSIPNLAVEDIIPKVNNMHGILEVLPSLSSYEKLILHFCGLDKVGDALDIVEQMCNAGFYLSTDVLQFILQICEESYEYILVHRIHSIICRYQLKLNGEIGRCLVHFCVRMKDFEGAYKIIGDLEEMNFKPTTNMYNAIMAGYFREKNISGGLRVLKHMQGANVTPDSQTFCYLIHNCETEEDIMKYCEEMKQHGIFATKQVLMALVNSYAACGKLEKAKQVVLDPNIPINSLIEIKSVLVVALASHGQLSEALLVYEQIKKAGHNLEPKAATCLIEELTQHYGELDKLLLLLKEVSDLDYWVDGCFRVILYCARNKNLSSAILLFKQLKDKFENDEMVMEALFDAVFSAIAESESTHLQIGLDLLWAIKDELDLMPSRQCLDFLLSACAKARDLNNARLIWREYEIAGFPYNVLSYLRMYQALLAAGDGKSASLMLKKIPGDDAEVCSVIIACQETYSAVDSVGEKKKQGKSKGRKSKDLNTSSTDMCSV 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01598 852 Pfam PPR repeat family 492 539 IPR002885 -
Phco9g01598 852 NCBIfam pentatricopeptide repeat 496 528 IPR002885 -
Phco9g01598 852 Gene3D Tetratricopeptide repeat domain 134 443 IPR011990 GO:0005515
Phco9g01598 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 493 527 IPR002885 -
Phco9g01598 852 Gene3D Tetratricopeptide repeat domain 544 665 IPR011990 GO:0005515
Phco9g01598 852 PANTHER OS02G0132600 PROTEIN 8 831 - -
Phco9g01598 852 MobiDBLite consensus disorder prediction 826 852 - -
Phco9g01598 852 Pfam PPR repeat 600 625 IPR002885 -
Phco9g01598 852 Gene3D Tetratricopeptide repeat domain 668 851 IPR011990 GO:0005515
Phco9g01598 852 Gene3D Tetratricopeptide repeat domain 444 543 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01598 Phco-Chr9 37495756 37545473 Dispersed