Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01571 ATGGCTACTACAATAACAGAAGAGTCCTCATCACGTGCCTCGCACGTGCTCAACTACACCCCCACCACCACCTCCGACGAGGAGGAGGAGGAGCATTTAGAAGGCAACGAGAACGAGTCCGCCGGCACAGGGTGGCGGTCAACGGCGGAGAGCGGCGGCGCGGGGCGGAGAACGTTGGGGAAGGTGTTGGACCCGAGGGCGAAGTGGGTCCAGGAATGGAACAGAGTGTTCCTGCTAGTGTGCGGCGCGGGGTTGTTCGTAGACCCTCTGTTCTTCTACGCGCTCTCCGTTAGCGACTCGTGCATGTGCGTGTTCGTTGACGGGTGGCTCGCCGTTACCGTGACGGTGCTGCGGTGCATGACGGATGCGCTGCACCTGTGGAACATGGTGCTCAGAATGAAGATGGCCAAACGCGCGTTCGGGTTGGGCGCCGCCGCCGGACTTAGAGACACTCGGCCGCGCAATGTCGCGCTAGGGTATCTTAAGTCACGGACGGGATTCGTTTTTGATTTGTTCGTGATTCTTCCTCTGCCACAGATTGTGCTTTGGGTAGCAATCCCGTCGTTGTTGGAGAAAGGTTCAGTGACGTTGGTGATGACAGTGTTCTTAATCATATTTCTCTTCCAATACCTTCCCAAAATTTATCATTCTGTTTGCCATCTGCGACGCACGCAAAACCTCTCTGGCTACATTTTTGGAACAGTTTGGTGGGGAATCGCCCTTAACATGATAGCTTATTTTGTTGCTTCCCATGCAGCAGGGGCATGTTGGTACTTGCTGGGGATTCAAAGGGCAGCAAAGTGTCTGAAAGTGCAGTGTGAAAAAACAAGTGGTTGTGGCATGAACATTCTGTCATGTCAAAGCCGTATATTTTATGGAAGCAATAAGAGTTTGTTGGTTAGGGATAGAGCAAGGTTGGCATGGGCAGAGAACAGGGAAGTGAGGCAAACATGCTTAAATGGCCCTGACAACTACAACTATGGAGCTTATAGATGGACCGTTCAGCTTGTCAAAAATAATAATCGTTTGGAAAAGATTCTTTTCCCTATCTTCTGGGGCCTAATGACTCTTAGCACGTTTGGAAACCTAGAAAGTACAACAGAATGGCTAGAAGTAGTTTTCAACATCATTGTGCTGACCAGTGGCCTTCTTCTTGTAACTATGTTGATCGGAAACATCAAGGTATTTTTGCATGCAACAACCTCAAAGAAGCAAGCAATGCAATTGAAGATGAGGAACATTGAATGGTGGATGAGGAAACGAAGGTTGCCACAAGGGTTTCGACAACGTGTGCGTAACTACGAGAGACAACGTTGGGCTGCCATGAGAGGTGTTGATGAATGCGAGATGACCAGAAATCTTCCTGAAGGGTTAAGAAGAGACATCAAGTACCATCTTTGTCTAGACTTGGTTCGACAGGTGCCTCTGTTTCAACACATGGACGATCTGGTTCTAGAGAACATTTGTGACCGTGTGAAGTCTCTTATATTCACGAAGGGAGAAACGATAGCAAGAGAAGGAGACCCAGTTCAGAGAATGTTGTTTGTAGTAAGGGGCCACCTTCAAAGCAGCCAAGTTCTAAGGGATGGTGTGAAGAGTTGCTGCATGTTAGGGCCAGGAAACTTCAGTGGTGATGAGCTTCTTTCATGGTGTTTGAGGAGACCCTTCATAGAACGTCTTCCACCATCTTCATCCACACTCATCACATTGGAAACCACAGAAGCTTTTGGCCTTGAAGCCGAGGATGTGAAGTACGTGACACAACATTTCAGGTACACCTTTGTTAAGGAAAAGGTGAAGAGAAGTGCAAGGTATTACTCACCAGGGTGGAGAACTTGGGCTGCAGTGGCCATACAATTGGCTTGGAGGAGGTACAAGCATAGGTTGACTTTGACCTCTCTGTCCTTTATAAGGCCTAGGAGACCCTTGTCAAGGTCCTCTTCCATGGGAGAAGATAGGCTTCGCCTCTACACTGCTTTGTTGACCTCACCAAAGCCTAATCAGGATGATTTTGACTTTTGA 2022 0.4866 MATTITEESSSRASHVLNYTPTTTSDEEEEEHLEGNENESAGTGWRSTAESGGAGRRTLGKVLDPRAKWVQEWNRVFLLVCGAGLFVDPLFFYALSVSDSCMCVFVDGWLAVTVTVLRCMTDALHLWNMVLRMKMAKRAFGLGAAAGLRDTRPRNVALGYLKSRTGFVFDLFVILPLPQIVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKVQCEKTSGCGMNILSCQSRIFYGSNKSLLVRDRARLAWAENREVRQTCLNGPDNYNYGAYRWTVQLVKNNNRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPQGFRQRVRNYERQRWAAMRGVDECEMTRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRSSSMGEDRLRLYTALLTSPKPNQDDFDF 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01571 673 Pfam Ion transport protein 73 393 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phco9g01571 673 Pfam Cyclic nucleotide-binding domain 497 584 IPR000595 -
Phco9g01571 673 FunFam cyclic nucleotide-gated ion channel 4 474 592 - -
Phco9g01571 673 Gene3D Helix hairpin bin 401 467 - -
Phco9g01571 673 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 48 638 - -
Phco9g01571 673 Gene3D Jelly Rolls 474 592 IPR014710 -
Phco9g01571 673 ProSiteProfiles cAMP/cGMP binding motif profile. 476 586 IPR000595 -
Phco9g01571 673 SUPERFAMILY Voltage-gated potassium channels 65 397 - -
Phco9g01571 673 MobiDBLite consensus disorder prediction 1 23 - -
Phco9g01571 673 SUPERFAMILY cAMP-binding domain-like 402 590 IPR018490 -
Phco9g01571 673 CDD CAP_ED 476 582 IPR000595 -
Phco9g01571 673 MobiDBLite consensus disorder prediction 1 57 - -
Phco9g01571 673 FunFam Cyclic nucleotide-gated ion channel 1 403 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01571 Phco-Chr9 36840700 36855063 Dispersed/Transposed