Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01528 ATGGAAATGGAGGAATTTTTATGGGGTGTTGACATTGATGGGGATGTCCCTAAGGGGAATAGTGACGGTTTTGAAGGAAGCAATGGAGTGATTGGAAGTGGGTGTGGTTCATCTTTCTCTCTGGTTTTGGATAGGGAGAGAGGGGAGCTTGTGGAAGCTCCTGTGAAATTGGAAAGGAAAGGGGTGTCCACTGAGAGAAGCTCTGAAGCTTTGAAGAACCATAGCGAGGCAGAGAGGAGGAGGAGGGCAAGGATTAATGCACATCTTGATACACTTCGCAGTGTCATTCCAGGTGCTATGAAGATGGACAAAGCATCATTACTTGGTGAGGTTATTAGACATTTGAAAGAGCTGAAAAGGAATGCAGCACAAGCTTGTGAAGGTTTGATGATACCAAAGGACAATGATGAAATAAGTGTTGAAGAACAAGAGGGTGGGTTGAATGGTTTTCCTTATTCAATTAGAGCATCACTATGTTGTGAATATAAACCTGGTCTATTGTCTGATATAAGACAAGCACTAGATTCTCTTCATCTTATGATAACAAGGGCAGATATTGCAACCTTAGAAGGCAGGATGAAGAATGTGTTCGTGATAATTAGCTGCAAAGAACACAACTTTGAAGATGCTTCATACCGTCAGTTTCTTGCTGGTTCTGTTCACCAAGCTCTGAAGTCTGTGCTCAATAGATTTTCTGTTTCACAAGACATTTTAGGAACCAAGAAAAGAAGGAGGATTTCTATATTCAGTTCTTCATCTTTAGAAGATTTCTTGTAA 777 0.4093 MEMEEFLWGVDIDGDVPKGNSDGFEGSNGVIGSGCGSSFSLVLDRERGELVEAPVKLERKGVSTERSSEALKNHSEAERRRRARINAHLDTLRSVIPGAMKMDKASLLGEVIRHLKELKRNAAQACEGLMIPKDNDEISVEEQEGGLNGFPYSIRASLCCEYKPGLLSDIRQALDSLHLMITRADIATLEGRMKNVFVIISCKEHNFEDASYRQFLAGSVHQALKSVLNRFSVSQDILGTKKRRRISIFSSSSLEDFL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01528 258 Pfam Helix-loop-helix DNA-binding domain 73 118 IPR011598 GO:0046983
Phco9g01528 258 CDD ACT_UUR-ACR-like 157 228 - -
Phco9g01528 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 69 118 IPR011598 GO:0046983
Phco9g01528 258 MobiDBLite consensus disorder prediction 61 80 - -
Phco9g01528 258 SMART finulus 75 124 IPR011598 GO:0046983
Phco9g01528 258 PANTHER TRANSCRIPTION FACTOR BHLH30 42 250 IPR045847 GO:0003700|GO:0006355
Phco9g01528 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 122 IPR036638 GO:0046983
Phco9g01528 258 Gene3D - 63 126 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01528 Phco-Chr9 35705528 35706820 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco9g01528 HLH 7.8e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01528 9 35705528 35706820 Phco9g01528 9 35705528 35706820 ECH