Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01510 ATGGCGTTCTGGGCTTTACAAGTCACATCTCGCACTCTGCAAGATGCCTCCATCTATGAGAGGCATGAGGAATGGATGGCTCGTTATGCCAAAGTCTACAAGGACCCTCAAGAAAGGGAAAAGCGTTTCAGGATATTCAAGCAAAATATGAATTACATTGAAGCCTTCAACAATGCTGCCGATAAACCTTACAAGCTAGCCATTAATCAATTTGCAGACCTCACCAACGAGGAGTTCATAGCACCAAGAAATAGACTCAAGGGGCACATGTGTTCCTCAATCATAAGGACAACCACTCTTAAGTACGAAAATGTGACATCAGTACCATCCACAGTGGATTGGAGGCAAAAGGGTGCAGTGACACCGGTCAAGGACCAAGGCCAATGTGTGGGATATGGTGTCAGCGATGATGGAACTGAGTATTGGTTGGTTAAGAACTCATGGGGAACTGAGTGGGGTGAAGAAGGATACATTAGGATGCAAAGGGGTGTAGATTCTGAGGAAGGACTGTGTGGCATAGCCATGCAAGCATCGTACCCCACTGCATAA 549 0.4608 MAFWALQVTSRTLQDASIYERHEEWMARYAKVYKDPQEREKRFRIFKQNMNYIEAFNNAADKPYKLAINQFADLTNEEFIAPRNRLKGHMCSSIIRTTTLKYENVTSVPSTVDWRQKGAVTPVKDQGQCVGYGVSDDGTEYWLVKNSWGTEWGEEGYIRMQRGVDSEEGLCGIAMQASYPTA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01510 182 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 11 129 IPR013128 GO:0008234
Phco9g01510 182 SMART Inhibitor_I29_2 22 79 IPR013201 -
Phco9g01510 182 Gene3D Cysteine proteinases 92 130 - -
Phco9g01510 182 Gene3D - 6 87 - -
Phco9g01510 182 Gene3D Cysteine proteinases 131 182 - -
Phco9g01510 182 Pfam Papain family cysteine protease 130 181 IPR000668 GO:0006508|GO:0008234
Phco9g01510 182 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 141 160 IPR025661 -
Phco9g01510 182 SMART pept_c1 30 181 IPR000668 GO:0006508|GO:0008234
Phco9g01510 182 SUPERFAMILY Cysteine proteinases 130 182 IPR038765 -
Phco9g01510 182 SUPERFAMILY Cysteine proteinases 16 129 IPR038765 -
Phco9g01510 182 Pfam Cathepsin propeptide inhibitor domain (I29) 22 79 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01510 Phco-Chr9 35327585 35328651 Proximal