Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01504 ATGGCTACCAAAACTCAATTCTATCACATTTCTTTGACATTGCTTTTCTGCATGGCAATCTGGGCTTTTCAAGTCACATCTCGCACTCTCCAAGATGCCTCCATGAATGAGAGGCATGAGGAATGGATGACTCGTTATGACCGAGTGTATAAGGACCCTCAGGAAAGGGAGAAGCGTTTAAGAATATTCAAGGAAAATGTGAACTACATTGAGGCCTTCAACAATGCTGCCAATAAACCTTACAAGCTTGCTGTTAATCAATTTGCAGACCTCACCAATGAGGAGTTCATAGCACCAAGAAATAGGTTCAAGGGTCACATGTGTTCCGCTATCACAAGGACAACCTCTTTTAAGTACGAAAATGTGACTGCAGTGCCTTCCACAGTGGATTGGAGGCAAAAGGGTGCAGTTACACCCGTGAAGGACCAAGGTCAATGTGCATCTAGCCATGCAGCCACCATTAAGGGGTATGAGGATGTCCCTGCAAACAATGAGAAGGCACTGCAAAAGGCTGTGGTCAATCAACCAGTGTCTGTAGCCATAGATGCCAGTGGCTCTGACTTTCAATTTTACGAGAGTGGTGTATTCACTGGGTCATGTGGAACAGAATTAGATCACGGTGTCACAGCTGTGGGATATGGTGTTAGTGATGATGGAACCGAGTATTGGCTGGATGGATATGAGATAGCAGTCACAGGAGCAAAGGAGAGACATAGCATGTGGTGCTGTTCTCAAGGACTTTCTTAA 747 0.4511 MATKTQFYHISLTLLFCMAIWAFQVTSRTLQDASMNERHEEWMTRYDRVYKDPQEREKRLRIFKENVNYIEAFNNAANKPYKLAVNQFADLTNEEFIAPRNRFKGHMCSAITRTTSFKYENVTAVPSTVDWRQKGAVTPVKDQGQCASSHAATIKGYEDVPANNEKALQKAVVNQPVSVAIDASGSDFQFYESGVFTGSCGTELDHGVTAVGYGVSDDGTEYWLDGYEIAVTGAKERHSMWCCSQGLS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01504 248 Gene3D Cysteine proteinases 150 224 - -
Phco9g01504 248 Pfam Papain family cysteine protease 151 224 IPR000668 GO:0006508|GO:0008234
Phco9g01504 248 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 146 224 IPR013128 GO:0008234
Phco9g01504 248 SMART pept_c1 125 235 IPR000668 GO:0006508|GO:0008234
Phco9g01504 248 Gene3D Cysteine proteinases 21 149 - -
Phco9g01504 248 Pfam Cathepsin propeptide inhibitor domain (I29) 39 96 IPR013201 -
Phco9g01504 248 SMART Inhibitor_I29_2 39 96 IPR013201 -
Phco9g01504 248 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 204 214 IPR025660 -
Phco9g01504 248 SUPERFAMILY Cysteine proteinases 34 224 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01504 Phco-Chr9 35205269 35208813 Tandem