Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01450 ATGATCACCACCACGCTCAGCCATTCAACCGGTTTCACAATTGCGGTTGACGCATCCGAGGATCCTCTCGTACCGTTTCTCTGGTCTATCAAGGAAGCCCTAGAAGCTTCGGACGAATCCACCTCGAACCTCGGTAACTTACTCAGAGATTGCATCAGAAACTTCAAGAACAATGACCGGTATCGGAACGACGTCAGATTCCTCAAGATCTGGCTCCTCTATATGGGAGTTACTGATGATTTTGTCAGTGTTTTCAAAGAAATGCTGGACAGTAATGTATGTGCCAAGAATTCTTCACTTTATGTGTGGTCTGCAAGTTTATTTGAGTTGAAGGGAAGATTGCGTTATGCTCTCTCCATCTACCAGCTTGGGATTGGCAGGAATGCGAAGCCAATTGAGTGGTTGAGGAAGGCGCTGACCTTATTTCTCAATAGGATGTCTGAAATACAGAATGCTGCTTCAAACCAGAAGGTTGATGATCTAGAATTCATGAAATTGGAAAATAGTGGCATTAATCCTTGGGACACTTCGACCATGGATAACCTGTTAAAGACTATACATCCTTTAATTATAAAATTTGATGGGTATCGTTCAAGGACTAAACCATACTCAGGAAAAGTGGTCTTATCTGCGTTGAAGAATTCATCAAGGAATAAAGTCATTGAGATAGGTGGAATGAAGTACCTTATAAAGGGATGTGCTGGACAGGGTGGTTTTGCCCAAGTATATAAGGCTAATGTCAACAGTGATCCTGACAATGTTGTTGCTCTAAAGATACAAAAACCAGCTTTCCCGTGGGAATTTTACATTTATCGTCAGCTTGATCTGCGCATCTTAGGCAGAGAGAGGTCAAGTTATGGTTTCGCTCACGGAATTCATCTGTATTCTGACTGTAGTATACTCATCTGTGACTATTTAGCTAATGGGACACTACAGGATGCGGTAAACTCATATGTGGTCTTAGGAAAATCCATGGAAGAAGTGTTATGCATTTATTATACAATTGAAATGTTACACATGGTTGAAACTTTGCATGGTGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTAATTCGATATGCTAGGGCTGACCTTACAGAAGATGGGTTCTTGAACCGAAGTGGTCCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATCTGCAACTCTTTCCAGATCACACGCTATTTACGGGTGATTGCAGAACTTCTGGTTTTCGCTGCATTGAGATGCTAGCGGATAAGCCGTGGAAATTTCAGGTAGATGCATATGGCCTTTGTGCTATTGTTCATGTGATGTTGCATGGTTCCTATATGGAAGTCGTCAAAAAAGAACAATCTGATGGGGGCTACCTGTATCTTCCCAGACTACCCTTTAAACGTTACTGGAACATTGAGCTATGGAAGAGTTTCTTCACTAAGATGCTAAACCAATACCCCCATGACGATGATAGGAGTTTGCTGCACGACTTGAAGAAGTCCTTCCAAGACTATATGGGCTCCAATCCCCAGCTTATAAAGAAACTAAAGGAGTTACTCTCTAAGCAAAGGGCTTCCATGTGTTCTGCTTAA 1596 0.4229 MITTTLSHSTGFTIAVDASEDPLVPFLWSIKEALEASDESTSNLGNLLRDCIRNFKNNDRYRNDVRFLKIWLLYMGVTDDFVSVFKEMLDSNVCAKNSSLYVWSASLFELKGRLRYALSIYQLGIGRNAKPIEWLRKALTLFLNRMSEIQNAASNQKVDDLEFMKLENSGINPWDTSTMDNLLKTIHPLIIKFDGYRSRTKPYSGKVVLSALKNSSRNKVIEIGGMKYLIKGCAGQGGFAQVYKANVNSDPDNVVALKIQKPAFPWEFYIYRQLDLRILGRERSSYGFAHGIHLYSDCSILICDYLANGTLQDAVNSYVVLGKSMEEVLCIYYTIEMLHMVETLHGVGLIHGDFKPDNLLIRYARADLTEDGFLNRSGPWCDQGLCLVDWGRGIDLQLFPDHTLFTGDCRTSGFRCIEMLADKPWKFQVDAYGLCAIVHVMLHGSYMEVVKKEQSDGGYLYLPRLPFKRYWNIELWKSFFTKMLNQYPHDDDRSLLHDLKKSFQDYMGSNPQLIKKLKELLSKQRASMCSA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01450 531 Pfam Mad3/BUB1 homology region 1 17 125 IPR013212 -
Phco9g01450 531 SMART mad3_bub1_i 5 125 IPR013212 -
Phco9g01450 531 ProSiteProfiles BUB1 N-terminal domain profile. 10 166 IPR013212 -
Phco9g01450 531 Gene3D Transferase(Phosphotransferase) domain 1 226 529 - -
Phco9g01450 531 SUPERFAMILY Protein kinase-like (PK-like) 227 490 IPR011009 -
Phco9g01450 531 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 167 525 IPR015661 GO:0007094
Phco9g01450 531 Pfam Protein kinase domain 235 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01450 531 SMART serkin_6 228 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01450 531 Gene3D - 12 164 - -
Phco9g01450 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Phco9g01450 531 FunFam Mitotic checkpoint serine/threonine-protein kinase BUB1 226 528 - -
Phco9g01450 531 ProSiteProfiles Protein kinase domain profile. 228 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01450 Phco-Chr9 33586671 33593671 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Phco9g01450 Pkinase 5.2e-12 CL0016