Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01441 ATGACTCAGTGCAGTGACCCTGAAAACAATCATCATAACATCATAGTGGAGGGACGAAAGGATAGCTTAATTAGAACTTGTCCTACATGTGGTCATCATATCAAATGCCAAGAACAGGGAGGTGGAATTCATGACTTACCTGGACTTCCCGCTGGTGTGAAGTTTGATCCTACAGATCAAGAGATTCTTGAACATTTGGAAGCCAAGGTGCGATCTGATATTCATAAGCTTCATCCTCTAATTGATGAGTTCATTCCCACACTTGAAGGCGAGAATGGAATCTGCTATACTCATCCAGAGAAGTTGCCAGGAGTTAGCAAAGATGGTCTGCTCCGCCATTTCTTTCACCGGCCTTCCAAGGCATACACCACAGGAACAAGGAAAAGGAGAAAGGTGAACTCAGATGAAGATGGCAGTGAGACACGTTGGCACAAAACAGGTAAAACTAGGCCAGTCTACAACAGTGCCAAGTTGAAAGGGTACAAGAAAATCCTTGTACTTTACACAAACTATGGAAAGCAAAGAAAGCCAGAGAAAACAAACTGGGTCATGCACCAATACCATCTTGGCAGTGATGAAGAGGAAAAAGAAGGAGAATTAGTGGTGTCTAAAGTTTTCTACCAAACACAGCCTAGACAATGTAGTTCTCTCATCAAAGACTCATCAGTTCCTGGGAAACATATGAAGGGTCAAAGCGTGCATGAGGTGATCAATAACAAAAACAAAAATGGGTTTGTTGAGTACTACCATTCAAATTTCATCTCATTTGATCAAGGATCCGGAGCTCAACATAGACCTACCACTGCTCAAGTAATTCCTCATTTTCCTGTCCATGAAGGTGCTCCTTTCAACATTCCTTGA 861 0.4228 MTQCSDPENNHHNIIVEGRKDSLIRTCPTCGHHIKCQEQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLLRHFFHRPSKAYTTGTRKRRKVNSDEDGSETRWHKTGKTRPVYNSAKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCSSLIKDSSVPGKHMKGQSVHEVINNKNKNGFVEYYHSNFISFDQGSGAQHRPTTAQVIPHFPVHEGAPFNIP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01441 286 MobiDBLite consensus disorder prediction 128 147 - -
Phco9g01441 286 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Phco9g01441 286 MobiDBLite consensus disorder prediction 122 148 - -
Phco9g01441 286 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 23 230 IPR044799 GO:0003700
Phco9g01441 286 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
Phco9g01441 286 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Phco9g01441 286 FunFam NAC domain-containing protein 73 58 212 - -
Phco9g01441 286 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01441 Phco-Chr9 33110679 33112639 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco9g01441 NAM 1.6e-22 No_clan