Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01433 ATGCTTGCCGTGGCACCTTTGAGGAGCATCAAAGATGAAAAGAACCAAGGAGAGACGGAGGGTTTCTCGATGGCTACAGCAACAACACCAGATGATGTTGACTTTGTTGACCTTTCTGAAGGGAACTTGTTGGAGAGCATCAACTTCGACGACCTCTTCGTCGGCATCGACGTTGACGGAGATGTATTGCCGGACTTGGAGATGTTTGGTGAGTTTTCCGTCAGCGCCGGTGAAGAGTCATCGGAGATGAACTCATCAGCAGAGAACACCAAGGAGGAAAATGATCAAAATTGTGTTATCACTGCTTCAAAGACGGAAGAGGAAGATAAAAGTTCTTGTGCTGCTTCACGTCAAGACTCGGGGTCAAACCCAGGAGAGGAGATAGTGAGCAATAAGAATGGTGAATCCGTGGTGGTGAATCCGGCTCCAAAGGAAGGTGGAAAAGGAAAAAAATCTTCATCGGCTCAACTGAAGAATAATAGTAATAGTAATAATCCTCAAGGGAAGAGAAAACTGAAGGTGGATTGGACCCCTGAATTGCACAGGAGATTTGTGCAAGCTGTGGAACAGCTAGGAGTGGACAAGGCAGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGATAGTCTCACTCGTCATAACATTGCTAGCCACCTTCAAAAATATAGATCTCATAGGAAACACTTGCTGGCTCGTGAGGCTCAAGCAGCAAGTTGGAGTCAAAGAAGGCACATATATGGTGTTGGTGGAAATGGAGGGAAGAGAGAGGGGAGTCCATGGCTAGCACCCACCATGGGATTCCCTCCTCCAATGACCACAATGCACCATTTTAGACCTCTGCATGTATGGGGACACCCCTCCACGGACCACTCCTTCATGCACATGTGGCCCAAACATCTTCCACCTTCACCACCACTCTCATGGCCATCACCTGCACCACCCCAAGACCCTTCTTTTTGGCACCAACGGGCTCCAACTGCACTAATACCCGGAACAGCTTGTTTCCCACAACCTCTGACACCAACGGGTTTTGGAACTCACCTTGTCCCTGGCATCCCACCCCATGCCATGTACAAAGTAGATCAAAGCATTGGCATCCAGGGTCCCCATCCCCTACTAGATTTTCATCCGTCAAAAGAGTGCATAGATGCAGCTATTGGAGATGTTTTATCAAAGCCATGGCTGCCCTTACCTCTTGGACTGAAGGCTCCAGTAATTGATAGTGTGATGAGTGAATTACAGAGACAAGGGATTCCAAACATTCCACCAACTAGTGCTTGA 1281 0.4785 MLAVAPLRSIKDEKNQGETEGFSMATATTPDDVDFVDLSEGNLLESINFDDLFVGIDVDGDVLPDLEMFGEFSVSAGEESSEMNSSAENTKEENDQNCVITASKTEEEDKSSCAASRQDSGSNPGEEIVSNKNGESVVVNPAPKEGGKGKKSSSAQLKNNSNSNNPQGKRKLKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHLLAREAQAASWSQRRHIYGVGGNGGKREGSPWLAPTMGFPPPMTTMHHFRPLHVWGHPSTDHSFMHMWPKHLPPSPPLSWPSPAPPQDPSFWHQRAPTALIPGTACFPQPLTPTGFGTHLVPGIPPHAMYKVDQSIGIQGPHPLLDFHPSKECIDAAIGDVLSKPWLPLPLGLKAPVIDSVMSELQRQGIPNIPPTSA 426
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01433 426 MobiDBLite consensus disorder prediction 1 26 - -
Phco9g01433 426 MobiDBLite consensus disorder prediction 115 137 - -
Phco9g01433 426 Pfam Myb-like DNA-binding domain 174 223 IPR001005 -
Phco9g01433 426 NCBIfam myb-like DNA-binding domain, SHAQKYF class 171 225 IPR006447 GO:0003677
Phco9g01433 426 SUPERFAMILY Homeodomain-like 170 228 IPR009057 -
Phco9g01433 426 FunFam Two-component response regulator 167 230 - -
Phco9g01433 426 MobiDBLite consensus disorder prediction 75 174 - -
Phco9g01433 426 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 425 IPR044825 GO:0003700|GO:0045893
Phco9g01433 426 MobiDBLite consensus disorder prediction 152 170 - -
Phco9g01433 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 168 227 IPR017930 -
Phco9g01433 426 Gene3D - 168 229 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco9g01433 Phco-Chr9 32271901 32276674 Dispersed/Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco9g01433 Myb_DNA-binding 4.2e-09 CL0123