Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01432 ATGTTTTCTGGCACCACCAACACTCTGCTCGATTTTCACCTCTTTTCCGTCGTAGTTCAACCCCCTTTCTTTTCTCAGTCATTTCTAGGGTTTCCAATTTCTTCGATGGCGCCCGATCCTAATCGTGCCGGCACCAGCGCCAGCACCAGTGCGTCCAAAGACGACGCCGTTACGAAGAAGAAGGTCGAGAACGAAGATCTGTCCGATGAGGATTTGGCGTTGAAGCAGCAGCTAGACCTTTACGTGGAGAGGGTTCAAGATGCCGACAAGGGATTGCAGAAGGTTGCACTCGAGAGCATGAGGCAAGAAATTCGAACTTCCACGAGCTCTATGACTTCCGTTCCTAAACCCTTGAAGTTTCTTCGCCCGCATTATGGAACTCTTAAGACGTATTATGAAACTATGGTCGAGTCTGATTTGAAGAAGTACCTTGCGGATATATTGTCGGTTTTGGCACTCACAATGTCTGCCGAAGGAGAACGAGAAAGCCTCAAGTATAGATTACTGGGTTCGGAGGGCGATATTGGTTCATGGGGCCACGAGTATGTTAGGAATCTGGCCGGAGAAATTGCACAAGAATACGCAAAACGACAGAGTGAAGAGACTCCCATAGATGATCTCATGGAACTCGTGCAACAAATAGTTGCTTTTCACATGAAGCATAATGCAGAACCTGAAGCTGTTGATCTTTTGATGGAGGTTGAAGACCTTGGTATGTTGAGTGCACATGTTGACAAAACAAATTTTAAAAGAACTTGCCTATATCTCACCAGTTCAGCAAGATACCTCCCAGGGCCAGATGATATGCTAGTTTTGGACATTGCATACTCAATTTATAAACAATTTGAAGAATATCCAAATGCTCTCCAAATTGCATTGTTCATGGATAACATGCAGCATGTGAGGGACGTGTTCACCTCTTGTAATGATGTGCTGCGAAAGAAGCAATTTTGTTACATGCTTGCACGTCATGGAATTACTTTTGAGCTTGATGAGGAGATGGCTGCAGATGATGAGGATAGAGAAATGTTTCAGGATATTATCAACAATTCTAAGTTAAGTGAAGGATATCTCACCCTTGCTCGTGATATTGAAGTTACGGAGCCCAAGTCCCCTGAGGATATATACAAGGCACACTTGCTTGATGGCCGGGCTAGTGCTGGTGCAAGTGTTGATTCAGCTAGACAGAACCTTGCTGCAACTTTTGTTAATGCATTTGTAAATGCTGGCTTTGGTCAGGATAAATTAATGACTGTTCCTTCAGATTCTTCAAGTAGTGCTTCTTCTGGAAATTGGCTTTTCAAAAACAAGGAACATGGGAAGACTAGTGCTGCAGCTAGTCTGGGTATGATTTTACTGTGGGACGTTGACTCAGGACTTGCTCAACTTGACAAGTACTTCCATAGTAATGATAATCATGTCATTGCTGGTGCATTATTGGGAGTTGGAATTGTCAATTGTAGTATCAAGAATGACTGTGATCCTGCAATGGCACTTCTTGGTGATTATACAGATAAAGAAGACACATCAATTAGGATTGGTGCTATAATGGGTTTGGGAATTGCATATGCTGGTTCCCAGAATGAGCAGTTACGGGAGAAATTGACAGGTGTACTGAATGATTCTAAAGCATCACTTGATGTGCTTGCTTTTACTGCTATTTCCCTGGGCTTGATCTTTGTGGGTTCTTGCAATGAGGAAATTGCCCAAGCTATTATATATACACTAATGGACAGGAGTGAGTCAGAGTTAGGAGAGCCCCTTACCCGACTTTTACCTCTTGGCCTTGGTCTTCTATATCTTGGGAAGCAGGACAGTGTTGAGGCAACTGCCGAAGTTTCAAAGACTTTTAATGAAAAAATTAGAAAGTATTGTGACATGACACTACTGTCATGTGCCTATGCTGGAACTGGAAATGTTCTCAAGGTTCAGAATCTCTTAGGTCATTGTTCTCAACATCTTGATAAAGGTGAAACTCACCAAGGTCCTGCTGTGCTTGGAATTGCTATGGTAGCCATGGCTGAGGAACTGGGAGTTGAGATGGCAATTCGATCATTAGAACATCTTCTGCAGTATGGAGAGCAGAATATTCGCCGAGCAGTTCCTCTCGCACTTGGTCTACTTTGTATATCAAATCCAAAGGTCAATGTTATGGATACCTTAAGCAGACTGAGCCATGATACTGATTCAGAAGTAGCTATGGCGGCAGTAATCTCCTTGGGTCTAATAGGTGCTGGAACGAACAATGCCCGAATTGCTGGCATGCTTCGTAATCTTTCAAGTTATTACTACAAGGATACCAGCCTTCTATTTTGTGTGCGGATTGCCCAAGGTCTTGTGCATTTGGGAAAGGGCTTATTAACACTTAATCCATATCATTCAGATCGTTTCCTACTATCACCGACAGCGCTTGCTGGACTAATTACCATGTTGCACGCATGCCTGGATATGAAGGCCATTGTGTTGGGGAAATATCACTATGTTCTGTACTTCCTCGTTTTGGCAATGCAGCCAAGGATGTTACTGACTGTGGATGAGAACTTGAAGCCTTTACCAGTGCCAGTTCGTGTTGGCCAAGCAGTAGATGTTGTTGGACAAGCAGGTCGTCCTAAAACAATTACTGGCTTTCAGACCCACTCCACCCCTGTTCTCCTGGCTGCCGGGGACAGGGCAGAGCTGGCAACGGAAAAATACCTTCCCCTATCGCCAATTCTTGAAGGTTTTGTAATTTTGAAGGAGAATCCAGATTATAGGGAAGAGTGA 2763 0.4379 MFSGTTNTLLDFHLFSVVVQPPFFSQSFLGFPISSMAPDPNRAGTSASTSASKDDAVTKKKVENEDLSDEDLALKQQLDLYVERVQDADKGLQKVALESMRQEIRTSTSSMTSVPKPLKFLRPHYGTLKTYYETMVESDLKKYLADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAKRQSEETPIDDLMELVQQIVAFHMKHNAEPEAVDLLMEVEDLGMLSAHVDKTNFKRTCLYLTSSARYLPGPDDMLVLDIAYSIYKQFEEYPNALQIALFMDNMQHVRDVFTSCNDVLRKKQFCYMLARHGITFELDEEMAADDEDREMFQDIINNSKLSEGYLTLARDIEVTEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDSSSSASSGNWLFKNKEHGKTSAAASLGMILLWDVDSGLAQLDKYFHSNDNHVIAGALLGVGIVNCSIKNDCDPAMALLGDYTDKEDTSIRIGAIMGLGIAYAGSQNEQLREKLTGVLNDSKASLDVLAFTAISLGLIFVGSCNEEIAQAIIYTLMDRSESELGEPLTRLLPLGLGLLYLGKQDSVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCSQHLDKGETHQGPAVLGIAMVAMAEELGVEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLIGAGTNNARIAGMLRNLSSYYYKDTSLLFCVRIAQGLVHLGKGLLTLNPYHSDRFLLSPTALAGLITMLHACLDMKAIVLGKYHYVLYFLVLAMQPRMLLTVDENLKPLPVPVRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAGDRAELATEKYLPLSPILEGFVILKENPDYREE 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01432 920 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 64 918 - -
Phco9g01432 920 MobiDBLite consensus disorder prediction 40 63 - -
Phco9g01432 920 Pfam Proteasome/cyclosome repeat 514 544 IPR002015 -
Phco9g01432 920 Pfam RPN1 N-terminal domain 78 380 IPR040892 -
Phco9g01432 920 SUPERFAMILY ARM repeat 75 784 IPR016024 -
Phco9g01432 920 PIRSF 26S_protsm_Rpn1 34 661 IPR016643 GO:0000502|GO:0030234|GO:0042176
Phco9g01432 920 PIRSF 26S_protsm_Rpn1 655 920 IPR016643 GO:0000502|GO:0030234|GO:0042176
Phco9g01432 920 Gene3D - 383 826 IPR011989 -
Phco9g01432 920 FunFam 26S proteasome non-ATPase regulatory subunit 2 homolog 383 823 - -
Phco9g01432 920 Pfam 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal 864 917 IPR041433 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01432 Phco-Chr9 32087315 32095106 Dispersed