Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01422 ATGAGCACCATTTGTTCAGAACACAAGTTCCAACTTCAACCCTCTCACCAACTTCTCTCCCTCAAGAAATCCCTAAGGGAAATTGACATCCCGCCAAGGAAGCTCCTCATGCGCCGCGCCGCCGCCGACATGTTTTCCGACGACACCCTCCTCCACAAATACCTCCCCAACAGCAAATCCATGGACTCCGACGACTCTGATGATGTCGGAGACCCTTATGCCTCCGACGAATTCCGCATGTTCGAGTTCAAGGTTCGTCGGTGCACTCGTAGCCGGAGCCATGACTGGACAGACTGTCCTTTTGCACACCCCGGCGAGAAGGCTCGCCGCCGTGACCCTCGTCGGTTTCATTACTCTGGGACGGTGTGTCCAGAGTATCGGCGCGGGCAGTGTAGCAGCGGCGATGCATGTGAGTTCTCTCATGGGGTGTTTGAGTGCTGGTTGCACCCTTCTAGGTATAGAACTGAGGCTTGCAAGGATGGGAAGAATTGCAAGCGAAAAGTTTGCTTTTTCGCTCACACCCCTCGCCAACTCAGGGTTTTGCCTCCACAAGACAGTAACAAGAAGAAAAAGTGCACCAATATGAGTCCTCATAATCATAATAATCATAGTAACCATTGCTGTTTGTTTTGTCATTGTTCATCTACTTGTTCACCAACTTCTACCTTGTTTGGCATGTCTCATTTTTCTCCTCCTTTATCACCTTCTTCCTCTTCATCTTCCCCTTCTAGGTTTGAGCCTAGCCACCGTCATGGTGTTGTGAGCTTCAAGGATGTGTTCTCCGAGCTTATGTGCTCCATGGAGGGTTTGAATTTTGGTGAGGCTTCATCTGTGTCTGCTTCTAAGCCTCACAGTCTGTCTTGGCTTGATGTCTCTGAGGATCATAAACAGTTCAATATTCATTCACCAACCATAGCTACTTGTGGAAGCTTTTCCAATAATGAGAATAGAAGATTTTTGAGGGAAGAAAGTAGAAGCTTTTCCATTAATGGGAATGGAAGATTTTCGAGGGAAGAAAGTGGGGTTGTTGATGATGTCATTACCCCAGATCTCGCGTGGGTTAATGACTTGCTGATGTAG 1080 0.4806 MSTICSEHKFQLQPSHQLLSLKKSLREIDIPPRKLLMRRAAADMFSDDTLLHKYLPNSKSMDSDDSDDVGDPYASDEFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTVCPEYRRGQCSSGDACEFSHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHTPRQLRVLPPQDSNKKKKCTNMSPHNHNNHSNHCCLFCHCSSTCSPTSTLFGMSHFSPPLSPSSSSSSPSRFEPSHRHGVVSFKDVFSELMCSMEGLNFGEASSVSASKPHSLSWLDVSEDHKQFNIHSPTIATCGSFSNNENRRFLREESRSFSINGNGRFSREESGVVDDVITPDLAWVNDLLM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01422 359 PANTHER UNKEMPT FAMILY MEMBER 43 358 IPR045234 -
Phco9g01422 359 ProSiteProfiles Zinc finger C3H1-type profile. 118 144 IPR000571 GO:0046872
Phco9g01422 359 SMART c3hfinal6 117 143 IPR000571 GO:0046872
Phco9g01422 359 SMART c3hfinal6 152 175 IPR000571 GO:0046872
Phco9g01422 359 FunFam Zinc finger CCCH domain-containing protein 66 75 143 - -
Phco9g01422 359 Gene3D - 118 181 - -
Phco9g01422 359 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 122 142 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01422 Phco-Chr9 31868633 31869712 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phco9g01422 zf-CCCH 9.5e-05 CL0537