Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01407 ATGAACGGAGATGAGAAGCAACCTCATGTGGAGACAATTTCTTTAGCAACAGACAAAGAGAACCTGAAGCTCCTCTTCGACAACCCTAGGTGTGTCCAAAACCCTGGGGACTTTGTTCTGACATTTCCTCAAGCCTACCACTCTGGGTTGAACTGCGGTTTCAATTGTGCTGAGGTTGTTAATGTAGCTCCTGTTGACTGGCTGTCGCATGGGCATATTGCTATAGAGTTGTACCAAGAACAAGGGCACAAGACTTCTATATCACATGATAAGTCCATGATTACATGTGATTCATATTGCAACAGAGATGGCAACAGTGGCTAA 324 0.4444 MNGDEKQPHVETISLATDKENLKLLFDNPRCVQNPGDFVLTFPQAYHSGLNCGFNCAEVVNVAPVDWLSHGHIAIELYQEQGHKTSISHDKSMITCDSYCNRDGNSG 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01407 107 PANTHER LYSINE-SPECIFIC DEMETHYLASE 30 93 - -
Phco9g01407 107 ProSiteProfiles JmjC domain profile. 1 79 IPR003347 -
Phco9g01407 107 Gene3D Cupin 22 105 - -
Phco9g01407 107 SUPERFAMILY Clavaminate synthase-like 30 93 - -
Phco9g01407 107 Pfam JmjC domain, hydroxylase 27 62 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01407 Phco-Chr9 30592952 30594339 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phco9g01407 JmjC 5.6e-12 CL0029