Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01393 ATGAAGAACAGGATGCAAAGAAATAATAGTGGAATGCATCCAGCCTGTGCAGCATGCAAGCATCAAAGGAAGAAATGCAGTGAAAATTGTATATTGGCACCTTACTTTCCATCAAACAGAAGCCGTGAGTTCCATGCTGTGCACAAGGTTTTTGGTGTTAGCAACATAACCAAGTTGGTAAAGAATGCTAGAGAGGACGATAGAAGAAGAGTTGTGGATTCATTGACATGGGAAGCATGCTGCAGGCAAAGGGACCCTATACATGGCCCTTATGGAGAGTACACAAAAGTTTACAATGAGTACAAGAAAGTGTTGGATGAACTTAAGAGATTCAGAAGCCAAAACCAAATGTTGCAGTTTCCCTCTCTAGGGTTAAAGTCTGTGCAAGATTTGATTGCTTGCAAAGGGGAAGACAAAGCAGAAGTTGATAATACATTGGATTATCTTCATGGAAAAAAGAATGGTATTATTGATTCTGAGATTTATAATACTTATTGTTCCAATTATTTGCAAGAGTTTCAGAATCTGAGGCCTCCTGAAGTTGTCATACCCTTTCAGCAGCACTCTCAACCATACTACATTACAGGTATTCATCTTTGA 600 0.3917 MKNRMQRNNSGMHPACAACKHQRKKCSENCILAPYFPSNRSREFHAVHKVFGVSNITKLVKNAREDDRRRVVDSLTWEACCRQRDPIHGPYGEYTKVYNEYKKVLDELKRFRSQNQMLQFPSLGLKSVQDLIACKGEDKAEVDNTLDYLHGKKNGIIDSEIYNTYCSNYLQEFQNLRPPEVVIPFQQHSQPYYITGIHL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01393 199 Pfam Lateral organ boundaries (LOB) domain 15 110 IPR004883 -
Phco9g01393 199 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 15 117 - -
Phco9g01393 199 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01393 Phco-Chr9 25299607 25300453 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco9g01393 LOB 7.4e-34 No_clan