Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01354 ATGTCAAAGCTTCTCCTGTCTTCCCTTTTTCTCACCACAAACCTTATCCTTCTAACCTCAATTTCATCCACAGAGTTCATCTACAACACCAACTTCAACTCCACCAACACCCTTGTCTGTGGCAACGCCACTATTGAATCTTCCATTCTTACCCTTACCAACCGTTCCACCTTTTCTGTTGGCCGTGCTTTCTACCCTTCCAAGATCCCCACCAAATCTTCCAACTCTTCAACCCCTTTAACTTTCTCAACCTCTTTTATTTTCTCCATTGCCCCATTCAAAGACCTTCTCCCTGGCCATGGCTTTGTCTTCATATTGTCACCTTCTGCAGGCACCACTGGGGTGAGTTCTGCTCAGCATCTTGGCCTCTTCAACTTTACCAACAATGGTGACCCCAACAACCATGTCTTTGGCATTGAGTTCGATGTGTTTAACAACCAAGAGTTCAATGACATTGATGACAATCATGTGGGGGTGGACATAAACTCTCTTGTTTCTTTTACTTCCCGTGCTGCTGGATTTTGGGGTGGGCAGGGTGGTGACAAGTTTGAGGATTTGAAGCTTAATAATGGTGAGAACTATCAGGTGTGGATTGAATATTTAGATTCTAGAGTTAATGTTACAATGGCTCTTGCAGGCCAAAATAGACCAAAGAAGCCTTTGATTAGTGAGCTTGTGGATCTTTCTGAAGTGCTTTTGGATGAAATGTATGTTGGATTTTGTGGGGCAACGGGGCAGCTAGTGGAGAGTCATAAGATTTTGGCTTGGAGCTTCAGTAACTCAAATGTTTCTATTGGTGATGCTTTAGTTACTACGAATTTGCCTTCATTTGTGCTTCCCAAAGAATCTATTTTTAGGTCAAAAGGTTTTGTTGTAGGGATCACTACAGGTGTTTTGTTTGCCATTGGTAGTGCAGTTGTAATATTTCTGTTTTTTCTCAGAAGAAAAAGGAGCCAAAGAAAGGAGGAGGAAGAAGATATTGAAGATTGGGAACTAGAGTATTGGCCACACCGTGTAAGATACGAGGACATTTATGCTGCAACTAAAGGATTTTCAGACCAAAATGTAATTGGGTTTGGAGGGAATGGAAAAGTCTATAAAGGGCTTCTGCAAGGTGTACAAGTTGCAGTCAAAATAACTCCTTGTGACAGTGAACAGGGAATGAGAGCGTTTGTGTCTGAGATTTCAAGTTTAGGCAGGTTGAAGCATAGGAATGTGGTTCCGTTGAGAGGTTGGTGTAAGAAAGAGAAAGGGAGCTTGATTTTAATCTATGACTACATGGATAATGGAAGTTTAGATAAAAGGATGTTTGATGGTGATGAGAACACAATTTTTGGGTGGGAGGAGAGAATGAAGGTGCTGAAGGATGTAGCTCATGGTATATTGTATTTGCATGATGGTTGGGAGGTTAGGGTGTTGCACAGAGACATCAAGTCAAGCAATGTGTTACTTGATAAGGATATGAATGCAAGGTTGGGGGATTTTGGACTTGCCACAATTCATCATCATGAGCCGATTGGTCAGACCTCACAAGTGATTGGAACTGTTGGTTTCATGGCACCAGAACTTATTCATACTGGGAGAGCCTCAACTCAGACTGATGTTTTCAGCTTTGGCGTGTTGGTTTTTGAGGTGGTGTGTGGGAGAAGGCCAAATGAGGAAAACAAGCCAACCTCGATTGTTTGGTTAATGAGGCTAATGGAGAGAGGAGAAGAGTGTTCTGCTCTTGATGAAAGATTAAAAGGGAGAAGTGAATGTAACATTGATGAGGTTAAGAGGGTTCTTCATCTTGGTTTGTTGTGCACTCATCCTGATCCTCATGTCAGGCCAAGTATGAGGCAGGTTGTGAAAGTGCTGGAGGGAGGGAATTTAGATGAAACCTTGCTTGACAAAATAAATTCAGCAGCCGGATATGTTGGGAGCTTTGGTAAAAACATTCACCCCACAATTGAGGATATTTTCTCCACCCACTGCTCTTACACAACTGTGTGTGACAGTGAGGGCAGATGA 2010 0.4249 MSKLLLSSLFLTTNLILLTSISSTEFIYNTNFNSTNTLVCGNATIESSILTLTNRSTFSVGRAFYPSKIPTKSSNSSTPLTFSTSFIFSIAPFKDLLPGHGFVFILSPSAGTTGVSSAQHLGLFNFTNNGDPNNHVFGIEFDVFNNQEFNDIDDNHVGVDINSLVSFTSRAAGFWGGQGGDKFEDLKLNNGENYQVWIEYLDSRVNVTMALAGQNRPKKPLISELVDLSEVLLDEMYVGFCGATGQLVESHKILAWSFSNSNVSIGDALVTTNLPSFVLPKESIFRSKGFVVGITTGVLFAIGSAVVIFLFFLRRKRSQRKEEEEDIEDWELEYWPHRVRYEDIYAATKGFSDQNVIGFGGNGKVYKGLLQGVQVAVKITPCDSEQGMRAFVSEISSLGRLKHRNVVPLRGWCKKEKGSLILIYDYMDNGSLDKRMFDGDENTIFGWEERMKVLKDVAHGILYLHDGWEVRVLHRDIKSSNVLLDKDMNARLGDFGLATIHHHEPIGQTSQVIGTVGFMAPELIHTGRASTQTDVFSFGVLVFEVVCGRRPNEENKPTSIVWLMRLMERGEECSALDERLKGRSECNIDEVKRVLHLGLLCTHPDPHVRPSMRQVVKVLEGGNLDETLLDKINSAAGYVGSFGKNIHPTIEDIFSTHCSYTTVCDSEGR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01354 669 PANTHER - 41 621 - -
Phco9g01354 669 FunFam L-type lectin-domain containing receptor kinase S.4 427 631 - -
Phco9g01354 669 ProSitePatterns Protein kinases ATP-binding region signature. 357 378 IPR017441 GO:0005524
Phco9g01354 669 Gene3D Transferase(Phosphotransferase) domain 1 427 633 - -
Phco9g01354 669 Pfam Protein kinase domain 352 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01354 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Phco9g01354 669 FunFam L-type lectin-domain containing receptor kinase S.4 22 266 - -
Phco9g01354 669 SMART serkin_6 351 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01354 669 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 312 426 - -
Phco9g01354 669 Coils Coil 313 333 - -
Phco9g01354 669 ProSiteProfiles Protein kinase domain profile. 351 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01354 669 Pfam Legume lectin domain 24 262 IPR001220 GO:0030246
Phco9g01354 669 SUPERFAMILY Protein kinase-like (PK-like) 331 621 IPR011009 -
Phco9g01354 669 Gene3D - 22 272 - -
Phco9g01354 669 Gene3D Phosphorylase Kinase; domain 1 312 426 - -
Phco9g01354 669 CDD STKc_IRAK 357 621 - -
Phco9g01354 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 263 IPR013320 -
Phco9g01354 669 CDD lectin_legume_LecRK_Arcelin_ConA 24 261 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01354 Phco-Chr9 15830221 15832230 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco9g01354 Pkinase 1.6e-45 CL0016