Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01353 ATGGGTTGCTTATGTTCTAAGAGTTCAGCTGTAGAGGACAGCAAGGTAGGTGTCACTAAGAAATTGCAATCGTATAGCACAAGGCCTTCAGAGTTGAATGTTTTGCGGTTAAATTCAACTAGGAGGGTTGATGAAGGTGGGGCTAAAGATGTGATAATAGACGGTGGTCATGTAAAAGGTTCATTGATTGACAAGAAGGCCAATGGTTCAGGGCAGTTGTATGTTGATCATGATGGGAAGAAGAAAATAGAGAAGCCTGAAGTGACTGTTGTGGATCATCTTGGCCCTGGAAGGATTCCAAAGGCTATAGAAGGAGAGCAAGTTGCAGCTGGATGGCCGGCATGGCTTTCTTCAGTTGCGGGTGAAGCTATTAAGGGATGGATACCTCGGAGAGCGAATAATTTTGAGAAGTTGGACAAAATTGGGCAAGGAACTTATAGTACTGTTTATAAGGCAAGGGATGTGATTAACCGCAAGTTTGTTGCATTGAAGAAAGTACGCTTTGACAATCTTGATCCTGAGAGTGTGAAGTTTATGGCAAGGGAAATCCATGTTTTGCGTAGGCTTGACCATCCAAACATTATAAAATTGGAGGGCTTGGTAACGTCACATATGTCTCGCAGCTTGTACCTTGTTTTTGAGTATATGGAGCATGATCTTACAGGACTTGCATCAAATCCTGACATCAAGTTCTCTGAACCACAGCTAAAATGCTACATGCAGCAGCTTCTTAGTGGATTGGATCATTGTCATAGTCATGGTGTCCTCCACCGTGACATAAAAGGCTCAAATCTTCTCATTGACAATAATGGAATCTTAAAAATCGCTGATTTTGGTTTGGCAAGTTTTTTTGACCCCCACCTCAGTGTTCCATTGACAAGCCGAGTAGTAACTCTATGGTATAGACCACCAGAACTTTTACTTGGAGCAAATCATTATGGGGTTGCAGTGGATTTGTGGAGCACTGGTTGCATACTGGGTGAACTATATACTGGAAGGCCCATTTTACCAGGAAAAACAGAGGTTGAGCAATTGCATCGAATTTTTAAACTTTGCGGCTCACCATCTGATGACTATTGGCTTAAATTGCGGCTGTCACATTCAACAGTATTCAGGCCGCCACACCATTATAGGCGATGTGTTGCAGAGACATTTAAGGACTACCCATCTACTGCTCTAAAGCTTATCGAGACTCTGCTTTCTGTAGAGCCGGCACATCGGGGAACTGCAGCAGCTGCTCTGAAAAGTGAGTTCTTTACATCAGAGCCTGTGCCTTGTGATCCATCAAGTTTACCGAAATATGCTCCCAACAAGGAAATTGATGCTAAATTACGAGAAGAAGCCAGAAGGCAAGGAGCTGTTGGAGGTAGGGACCAAAAACTTGCCTCGGGAGTTAGACAAGAAAAAGGACATAGGGCCAGCATCACCACAAAAGACAGTGCTGAACCAGCTTTATCAGTACAGCAAGGACGTTATTCCAGCTCAAAGAACCAAAGTGAATTATACAACCCTCATAGGGGAGCAGTGTCTGGGATTCTGGTTTTCCCTCACAAAAAGTCAGAAGATGCTAAAGAAATTGAAAATAATTTTTCTGGGCATATTTATAAAAAGCCATCACATTCAGGCCCATTGGTTCCGGGTTCTCTTTGGGCAAAAGGTGCGAAGGAAGTTGATGATGTACCTTCTGTTTCAATCAGGGGGAACCTATCAAAACTATCTGGGCTAGTGGCATCTAGGACATTGTTGCCAGAAGATCAGGAGGATAAACCAGTTCACTTGCACCACAGAAAACCAAGTGAAGTAAGGAAATCAATGGAGTCAACTAACGGATCAGAGTCAAGAAGAAGGCAGGAACAAAAACGGATTGTTGATCACAATCAAATTGAAAGCAGAAGGGTCCCGACCGAAAAATCAACTCCGGGAGGGCGTGAGTCGATGGGAAACAAGATATACCTCTCAGGTCCATTAATGGTGTCATCAAGCAACATGGATCAAATGCTCAAAGAGCATGATCGAAAAATACAAGAGTTTTCAAGACGAGCAAGAATTGACAAGTCAAGAGCAAGAGGTGAGAAAGTTCTTGCACAGCGGAAGTGGTGA 2100 0.4329 MGCLCSKSSAVEDSKVGVTKKLQSYSTRPSELNVLRLNSTRRVDEGGAKDVIIDGGHVKGSLIDKKANGSGQLYVDHDGKKKIEKPEVTVVDHLGPGRIPKAIEGEQVAAGWPAWLSSVAGEAIKGWIPRRANNFEKLDKIGQGTYSTVYKARDVINRKFVALKKVRFDNLDPESVKFMAREIHVLRRLDHPNIIKLEGLVTSHMSRSLYLVFEYMEHDLTGLASNPDIKFSEPQLKCYMQQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPHLSVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSDDYWLKLRLSHSTVFRPPHHYRRCVAETFKDYPSTALKLIETLLSVEPAHRGTAAAALKSEFFTSEPVPCDPSSLPKYAPNKEIDAKLREEARRQGAVGGRDQKLASGVRQEKGHRASITTKDSAEPALSVQQGRYSSSKNQSELYNPHRGAVSGILVFPHKKSEDAKEIENNFSGHIYKKPSHSGPLVPGSLWAKGAKEVDDVPSVSIRGNLSKLSGLVASRTLLPEDQEDKPVHLHHRKPSEVRKSMESTNGSESRRRQEQKRIVDHNQIESRRVPTEKSTPGGRESMGNKIYLSGPLMVSSSNMDQMLKEHDRKIQEFSRRARIDKSRARGEKVLAQRKW 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01353 699 SUPERFAMILY Protein kinase-like (PK-like) 128 427 IPR011009 -
Phco9g01353 699 MobiDBLite consensus disorder prediction 448 503 - -
Phco9g01353 699 FunFam probable serine/threonine-protein kinase At1g54610 218 458 - -
Phco9g01353 699 MobiDBLite consensus disorder prediction 462 476 - -
Phco9g01353 699 PANTHER CELL DIVISION PROTEIN KINASE 133 425 - -
Phco9g01353 699 CDD STKc_CDK9_like 135 419 - -
Phco9g01353 699 MobiDBLite consensus disorder prediction 581 648 - -
Phco9g01353 699 MobiDBLite consensus disorder prediction 479 503 - -
Phco9g01353 699 MobiDBLite consensus disorder prediction 582 638 - -
Phco9g01353 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Phco9g01353 699 ProSiteProfiles Protein kinase domain profile. 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01353 699 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Phco9g01353 699 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Phco9g01353 699 Gene3D Phosphorylase Kinase; domain 1 122 217 - -
Phco9g01353 699 Gene3D Transferase(Phosphotransferase) domain 1 218 457 - -
Phco9g01353 699 Pfam Protein kinase domain 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01353 699 SMART serkin_6 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01353 Phco-Chr9 15602485 15607374 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phco9g01353 Pkinase 3.3e-68 CL0016