Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01220 ATGACAAACAAAAAACAGAAGCTATCAACGTCTTCGTTCAGACACGACCAGGTCATTGATTGGACCCGTTCCACTTTCCTTCCTCTCACACACTCACAACCCCACCAAGCACATAATATCTACCTTCATCGGCTTCTCTGCAACTTGCACGGTGGAATCAGCCAAACCATTAACAACATGTGGAACAAGAAACCACCCTTGTTATGGCTTTCTCTCCTCATCACATACTTCTTCTCTTTCCACACCTACACATCACTCGCAGCTTTGACCACCATCTCAGCAAATCAATCTCTCTCTGGAGATCAAACTCTTGTCTCCGCAGAGGGACACTTTGAATTGGGTTTCTTCACCACAGGTAACAACTCTAAATACTATATAGGCATGTGGTACAGAAAGATATCACAAAAGACTTATGTTTGGGTAGCAAATAGAGACACCCCAGTTTCTGATAAGAATTCTGCTAAATTAACAATATTGGATGGTAATTTAGTGGTCTTAAACGAGTTCCAAAATATAGTTTGGTCAACGAATTTGAGTTCTTCTAGCTCAGGTTCTGTGGTAGCTGTGCTTCTAGATTCTGGGAATCTTATATTAAGCAATAGGCCTAATGCATCAGCAACTGATGCTATGTGGCAGAGTTTTGATCACCCCACAGACACGTGGCTTCCCGGTGGCAAGATAAGTTTGAACAACAAAACAAAGAAGCCACAGTATCTCACTTCATGGAAGAATATTGAAGATCCTGCAACGGGTATTTTCTCTCTTGAACTAGACCCTGCAGGAAGCACTGCATATTTGATTCGTTGGAATAAAACTGAGCAGTATTGGTCAAGTGGTGCTTGGAATGGACACATTTTCAGCTTGGTTCCTGAGATGAGACTAAATTACATCTACAATTTCAACTTTGAGTCCAATGAGAACGAGAGCTACTTCACTTACTCCTTGTATAACGACTCTATTATATCTCGCTTTTTTATGGATGTCTCGGGGCAGATTAAGCAACAGACGTGGCTGGAGAATGCTCAACAGTGGAATCTGTTCTGGTCTCAGCCTAGGCAACAGTGTGAGGTCTATGCCTTCTGTGGTGGATTTGGGAGCTGCACTGAGAATGCCATGCCATATTGTAAATGTTTGACTGGGTATGAGCCAAAGTCACAATCTGATTGGAATCTTACGGATTACACAGGAGGGTGTGTGAGAAAGACGGAGCTGGGATGTGACTCACCAAATTCCTCTAGCAAGGACAATGACAGGTTCCTTCCAATTCCCAACATGAAATTGCCTAATCATTCACAATCCATAGGAGCTGGGGATGTTGGGGAATGTGAAGCAAAATGCTTGAGTAACTGTTCTTGTACTGCATATGCTTATGACAATAATGGTTGCTCAATTTGGTATGGTGATCTCTTGAACCTGCAACAGCTTACTCAAGATGACAGCAGTGGGCAGACTTTGTTTCTCAAACTTGCAGCGTCTGAGTTTCATGATTCTAAAAGCAATAAAGGGATAGTCATTGGTGCTGTTGCTGGAGCTGTTGGTGTTGTGGTGGTTCTTCTAATTGTCTTTGTTTTTGTGATTCTGCGGCGTAGAAAGAGACATGTTGGGACAGGAACATCCGTGGAGGGCTCATTGGTGGCATTTGGGTATAGGGATTTGCAAAATGCCACGAAGAATTTCTCAGAGAAACTGGGAGGAGGGGGTTTTGGCTCTGTCTTCAAAGGAACATTGCCTGATTCTAGTGTCATTGCAGTTAAGAAGCTTGAAAGCATTAGCCAAGGTGAGAAGCAGTTCAGAACAGAAGTGAGCACAATTGGGACAGTCCAGCATGTCAATCTTGTAAGGCTTCGCGGGTTCTGTTCTGAAGGTACTAAGAAACTTCTGGTTTATGATTACATGCCGAATGGTTCCTTGGACTCCAAAATATTTCAGGAAGATAGATCCAAGGTGTTGGATTGGAAAGTGAGGTACCAAATTGCTCTTGGAACAGCGAGGGGGTTGACTTATCTTCACGAGAAGTGTAGAGACTGCATCATACACTGTGATGTGAAGCCAGAAAATATTCTCCTTGATGCTGATTTTGTTCCAAAGGTGGCAGACTTTGGCCTTGCAAAGCTGGTTGGAAGGGACTTCAGCAGGGTCCTCACTACCATGAGAGGGACAAGAGGTTATCTTGCCCCAGAGTGGATATCAGGTGTGGCTATAACTGCCAAAGCTGACGTCTACAGCTACGGAATGATGCTTTTTGAGTTGGTGTCAGGTAGGAGGAACTCTGAGGCATCGGAAGATGGCCAAGTGAGGTTCTTCCCTACTTTTGCTGCAAACATGGTCCACCAAGAAGGGAATGTGCTTAGCTTGTTGGACCCTAGGTTGGAGGGAAATGCTGACATTGAAGATGTCAATAGAGTCATCAAAATTGCTTCATGGTGTGTCCAGGATGAGGAATTTCACAGGCCTTCCATGGGTCAGGTGGTTCAAATCCTTGAAGGGTTCTTGGAAGTAACTTTGCCTCCAATTCCAAGGACCCTCCAAGCCTTTGTTGACAAACATGAGAGCATAGTTTTCTTCACTGAATCCAGCTCCACACAGAGTTCACAGGTAAAGAGTAATACCTCAAGTACCTCCTCTCAACCCAAGAGCAACACCCCATCCAATACTTCCAAGTCCTCATGA 2670 0.4401 MTNKKQKLSTSSFRHDQVIDWTRSTFLPLTHSQPHQAHNIYLHRLLCNLHGGISQTINNMWNKKPPLLWLSLLITYFFSFHTYTSLAALTTISANQSLSGDQTLVSAEGHFELGFFTTGNNSKYYIGMWYRKISQKTYVWVANRDTPVSDKNSAKLTILDGNLVVLNEFQNIVWSTNLSSSSSGSVVAVLLDSGNLILSNRPNASATDAMWQSFDHPTDTWLPGGKISLNNKTKKPQYLTSWKNIEDPATGIFSLELDPAGSTAYLIRWNKTEQYWSSGAWNGHIFSLVPEMRLNYIYNFNFESNENESYFTYSLYNDSIISRFFMDVSGQIKQQTWLENAQQWNLFWSQPRQQCEVYAFCGGFGSCTENAMPYCKCLTGYEPKSQSDWNLTDYTGGCVRKTELGCDSPNSSSKDNDRFLPIPNMKLPNHSQSIGAGDVGECEAKCLSNCSCTAYAYDNNGCSIWYGDLLNLQQLTQDDSSGQTLFLKLAASEFHDSKSNKGIVIGAVAGAVGVVVVLLIVFVFVILRRRKRHVGTGTSVEGSLVAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTKKLLVYDYMPNGSLDSKIFQEDRSKVLDWKVRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDADFVPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNSEASEDGQVRFFPTFAANMVHQEGNVLSLLDPRLEGNADIEDVNRVIKIASWCVQDEEFHRPSMGQVVQILEGFLEVTLPPIPRTLQAFVDKHESIVFFTESSSTQSSQVKSNTSSTSSQPKSNTPSNTSKSS 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01220 889 SUPERFAMILY alpha-D-mannose-specific plant lectins 124 282 IPR036426 -
Phco9g01220 889 PANTHER OS07G0415500 PROTEIN 70 839 - -
Phco9g01220 889 SMART blect_4 95 217 IPR001480 -
Phco9g01220 889 CDD B_lectin 95 217 IPR001480 -
Phco9g01220 889 PIRSF SRK 61 878 IPR024171 GO:0004674
Phco9g01220 889 SMART ntp_6 414 489 IPR003609 -
Phco9g01220 889 Pfam PAN-like domain 413 471 IPR003609 -
Phco9g01220 889 Gene3D Transferase(Phosphotransferase) domain 1 632 834 - -
Phco9g01220 889 ProSiteProfiles PAN/Apple domain profile. 406 490 IPR003609 -
Phco9g01220 889 Gene3D Phosphorylase Kinase; domain 1 523 631 - -
Phco9g01220 889 SUPERFAMILY Protein kinase-like (PK-like) 543 863 IPR011009 -
Phco9g01220 889 FunFam Serine/threonine-protein kinase 84 214 - -
Phco9g01220 889 FunFam Serine/threonine-protein kinase 632 835 - -
Phco9g01220 889 SMART serkin_6 557 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01220 889 Pfam S-locus glycoprotein domain 276 385 IPR000858 GO:0048544
Phco9g01220 889 CDD STKc_IRAK 563 830 - -
Phco9g01220 889 ProSiteProfiles Bulb-type lectin domain profile. 89 211 IPR001480 -
Phco9g01220 889 CDD PAN_AP_plant 402 490 - -
Phco9g01220 889 ProSiteProfiles Protein kinase domain profile. 557 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01220 889 Pfam D-mannose binding lectin 137 243 IPR001480 -
Phco9g01220 889 MobiDBLite consensus disorder prediction 858 889 - -
Phco9g01220 889 Gene3D - 85 214 IPR036426 -
Phco9g01220 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Phco9g01220 889 Pfam Protein kinase domain 560 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01220 889 ProSitePatterns Protein kinases ATP-binding region signature. 563 586 IPR017441 GO:0005524
Phco9g01220 889 FunFam Serine/threonine-protein kinase 524 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01220 Phco-Chr9 11810476 11813474 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco9g01220 Pkinase 3e-48 CL0016