Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01215 ATGAAGAAGTGCGAACTGTGCAAGCTTCCAGGGAGGATTTTCTGCGAGTCGGACCAGGCCAGCTTATGCTGGGACTGCGACGCAAAGGTTCACGGCGCCAACTTCTTGGTGGCCAGACACTCGCGAACGCTCCTCTGCCGCTCGTGCCACTCTCCCACGCCGTGGAAGGCCTCCGGCGCCAGACTCGCTAACGCTGCCTCCATCTGCAACCGATGCGCCGCCTCCACCGCGGAAGAACAGGACGAGACCGAATCCGGCAATGACGAGGAACCAGACACCGAGGACGACGATGTCTCCGGCGAGGAGGATGGCGAGAACCAGGTCGTGCCGTGGTCCTCCACATCGCCGCCCCCGGCGAGCTCCTCCGGCAGCGAGTGGTCGTCTTTCAGCGGGTGCAAAAACGACGACGACGAAGGTGCTTCTCGTTCCGCATGTGAACCGGAAACGGCAACATCCTCGTTGAAGCGACCTCGCGAGAACGACGACGACGTTTCCGGTCGTGATCCGCTGGGGATTGGAAGTGTTAGGCGTCTGAGCGGAGGTGGCGTGTGA 552 0.6232 MKKCELCKLPGRIFCESDQASLCWDCDAKVHGANFLVARHSRTLLCRSCHSPTPWKASGARLANAASICNRCAASTAEEQDETESGNDEEPDTEDDDVSGEEDGENQVVPWSSTSPPPASSSGSEWSSFSGCKNDDDEGASRSACEPETATSSLKRPRENDDDVSGRDPLGIGSVRRLSGGGV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01215 183 MobiDBLite consensus disorder prediction 106 130 - -
Phco9g01215 183 MobiDBLite consensus disorder prediction 152 166 - -
Phco9g01215 183 SMART bboxneu5 1 45 IPR000315 GO:0008270
Phco9g01215 183 CDD Bbox1_BBX-like 3 45 - -
Phco9g01215 183 MobiDBLite consensus disorder prediction 77 183 - -
Phco9g01215 183 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 144 - -
Phco9g01215 183 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Phco9g01215 183 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Phco9g01215 183 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01215 Phco-Chr9 11754127 11754786 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco9g01215 zf-B_box 5.7e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01215 9 11754127 11754786 Phco9g01215 9 11754127 11754786 ECH
Phco10g01268 10 34940282 34941175 Phco9g01215 9 11754127 11754786 PCT