Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01212 ATGGTAAACATCAAGAGAGAGACCAGAAGGATAATTATCCTTAACTGGTCCTCCAGTCACATGCTGTCTACCTTCCTCTTCTGCGCATTGTTTATCACTTTTAGTTTTAAGCATTGCTCAGCCACAGATGCTATAACCATTAACAACTTCTTGCAAGATTGGGGAGGGGATACTCTTATTTCAAAAGGAGGAAAGTTTGAGCTAGGGTTTTTTACTCCTAATGGCAGCTCTAGTGGGAGAAGATATGTGGGAATATGGTACTACAAGTTGACTCCTCTAACAGTTGTGTGGGTTGCTAACAGAGACAAACCACTTCTAGATTCTTGGGGTGCTTTTGGCATTGGAGAAGATGGGAATCTAAAGGTTTTGGACAGAAGTGGGAAAGCCTACTGGGGCACAAACCTTGAAGAATCAGCTTCACAACACAGAACAGTGAAGATAAGGGACAGTGGGAACCTTATTGTTAGTGATGAAGTTGAAGAGCAAGAGGATCATCAAGTTAAGATTCTGTGGCAGAGTTTCGCTAATCCAACAGATACATTCCTTCCTGGAATGAAAATGGATGGTAATTTAGCACTAACATCATGGAGAAGTTATGAAGACCCTGCACCAGGGAACTTCACTTTTGTGCATTGTCAAGGAGAGAACCAGTACGTCATATGGAAGAGGTCCATCAAGTATTGGAAAAGCAGTGTTTCAAACAGGTTTTCCGGAAGTGATGAGATGTCTCCAGCAATATCTTACTTGTTGTCAAATTTCACCTTGAGAGTATCCCCAAACGACACTGCTCCCTTTCTCACTTCAGCACTTTATAGTTACACAAGGTTGGTGATGACTCACTGGGGTCAACTTAAGTACATGAAGATGAAGATGGATTCAGAGAAAGTGTGGTCGTTGGTTTGGGTGGAGCCAAGAGATAGATGCAGTGTGTTCAATGCCTGTGGAAACTTTGGAAGCTGTAATAGCAAGTATGACTCCATGTGCAAGTGTTTGCCTGGGTACAAGCCTAATTCTATTAAGAGTTGGAATGCTGGAGACTTTTCAGGTGGATGCAGCAGGAAAACAAATGTCTGCAGTGGGGATGCTGAGAGAGCTACATTTTTGAGTTTGAAAATGATGAAAGTAGGGAACCCGGATGCTCAATTTAATGCCAAGAATGAAGAGGAATGCAAATCAGAGTGCCTCAACAATTGCCAGTGCTATGCATATTCATATGAAGGCACTGAAAAGGATGCTGTTTGCTGGATTTGGTATGAGGACTTGAACAATCTTGAAGAAGAGTACGAGGACGGGTGTGACCTGCATGTTCGCATGGCATTTTCTGATATAGAATCCACTGGGAACAGTTGTGGAACTTGTGGTACAAATTTCATTCCATATCCCCTAAGCACAGGACCAAGTTGTGGTGACCCCGTGTACTTCAGTTTTCAATGCAACAATTCCTCTGGTGAGCTTGATTTTAAAACTCCTGGGGGAACCTATCAAGTGATTAGCATAAACCCAGACACACGAAAATTCTTGATCCACAGAAAAGATGTACTTAACTGTGATCAGGGTTCAAGGGATAAGTTTCTGTCTCTCAACCAGTCATTTCCGTTTCACCTTAGTGGCTATTGTCATGCTGATCCAAGCATTTTTAGTTCTAATGCTCCCATGAAACAAGGAGTACAAATAGAATTCAGTTGGGAGCCCCCATTCGAGCCTATGTGCTCTTCGTTGTTGGACTGCAAGGATTGGCCAAATTCAACTTGCAACATCACCAGAGATGGCAAGAAGAGATGTCTTTGCAACACAAACTTTATTTGGGATGGATTGAAATTAAACTGCACTTTAGAAGGCCATAACATCTATCAATCAGAAAGGCAACTGTCCTTACCTAAGATCATTGTAATTACTTTTACAACTGTGATTGGCTTAATTCTTCTGTCAACTACTCTTACATGTGTTTACTTAAGGAAAAGGAGACAGAGCAAACCACAAGATAGCAGGGGATATGTACAGAAAAACTCAGGGTTTAACTTGTATGACAGTGAGAGATATGTCAGAGACTTGATTGAATCTGGTAGTTTCAAAGAAGATGATGCACAGGCCATAGATATTCCCTTTTTCCATTTAGAAAGCATACTTGGGGCCACTAACAATTTTGCAAATGCAAACAAGCTTGGACAAGGTGGGTTTGGTCCAGTCTACAAGGGAAAATTTCCTGGAGGACAAGAAATAGCAGTAAAGAGACTCTCAAGTTGTTCCGGACAAGGTTTAGAAGAATTTAAAAATGAAGTTGTGTTGATTGCAAAGCTTCAACATAGAAACCTAGTGAGACTTCTGGGGTACTGTGTGGAAGGAGATGAAAAGATGCTAATTTATGAATATATGCCAAATAGAAGCTTGGATGCTTTCATTTTTGATCAGAAGCTGTGTGTTCTATTAGACTGGGATGTGCGCTTCAAGATTATTTTGGGAATTGCTCGAGGGCTCCTTTACTTGCATGAAGATTCTAGGTTGAGGATTATTCATAGGGACTTGAAAACAAGTAACATTCTACTAGATGAAGAGAAGAATCCTAAAATCTCAGACTTTGGCTTAGCCAGGATATTTGGAGGAAAAGAGACAGTAGCTAACACAGATAGAGTGGTTGGAACATATGGATATATGTCTCCAGAGTATGCACTTGATGGACACTTTTCAGTCAAATCTGACGTATTTAGCTTTGGTGTGGTGGTACTTGAGATAATTAGTGGAAAAAGGAACACAGGATTTTATCAACCAGAACATAAATTGAGTCTTCTAGGATATGCATGGCTTTTGTGGAAAGAAGGAAGGGAATTGGAATTCATGGACCAAACACTTAGCCAAACATGCAATGCAGATGAATGCTTGAAATGTGTGAATGTGGGGCTCTTGTGCTTACAAGAAGATCCAAATGAACGTCCCACAATGTCAAATGTGGTTTTGATGCTTGGTAGTGAATCTAACACTCTTCCAAGTCCTAAGGAACCAGCCTTTGTTATCAGGAGATGCTCTTCAAGTAGAGCATCTACTTCAAGTAAACTTGAAACCTTTTCACGTAATGAATTGACAGTCACTATAGAACATGGGAGGTAG 3102 0.4084 MVNIKRETRRIIILNWSSSHMLSTFLFCALFITFSFKHCSATDAITINNFLQDWGGDTLISKGGKFELGFFTPNGSSSGRRYVGIWYYKLTPLTVVWVANRDKPLLDSWGAFGIGEDGNLKVLDRSGKAYWGTNLEESASQHRTVKIRDSGNLIVSDEVEEQEDHQVKILWQSFANPTDTFLPGMKMDGNLALTSWRSYEDPAPGNFTFVHCQGENQYVIWKRSIKYWKSSVSNRFSGSDEMSPAISYLLSNFTLRVSPNDTAPFLTSALYSYTRLVMTHWGQLKYMKMKMDSEKVWSLVWVEPRDRCSVFNACGNFGSCNSKYDSMCKCLPGYKPNSIKSWNAGDFSGGCSRKTNVCSGDAERATFLSLKMMKVGNPDAQFNAKNEEECKSECLNNCQCYAYSYEGTEKDAVCWIWYEDLNNLEEEYEDGCDLHVRMAFSDIESTGNSCGTCGTNFIPYPLSTGPSCGDPVYFSFQCNNSSGELDFKTPGGTYQVISINPDTRKFLIHRKDVLNCDQGSRDKFLSLNQSFPFHLSGYCHADPSIFSSNAPMKQGVQIEFSWEPPFEPMCSSLLDCKDWPNSTCNITRDGKKRCLCNTNFIWDGLKLNCTLEGHNIYQSERQLSLPKIIVITFTTVIGLILLSTTLTCVYLRKRRQSKPQDSRGYVQKNSGFNLYDSERYVRDLIESGSFKEDDAQAIDIPFFHLESILGATNNFANANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLIYEYMPNRSLDAFIFDQKLCVLLDWDVRFKIILGIARGLLYLHEDSRLRIIHRDLKTSNILLDEEKNPKISDFGLARIFGGKETVANTDRVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQPEHKLSLLGYAWLLWKEGRELEFMDQTLSQTCNADECLKCVNVGLLCLQEDPNERPTMSNVVLMLGSESNTLPSPKEPAFVIRRCSSSRASTSSKLETFSRNELTVTIEHGR 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01212 1033 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 37 174 - -
Phco9g01212 1033 CDD PAN_AP_plant 358 439 - -
Phco9g01212 1033 Gene3D - 38 176 IPR036426 -
Phco9g01212 1033 Pfam D-mannose binding lectin 94 190 IPR001480 -
Phco9g01212 1033 Pfam PAN-like domain 363 423 IPR003609 -
Phco9g01212 1033 Gene3D Phosphorylase Kinase; domain 1 682 790 - -
Phco9g01212 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Phco9g01212 1033 ProSiteProfiles PAN/Apple domain profile. 358 432 IPR003609 -
Phco9g01212 1033 SMART serkin_6 715 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01212 1033 Pfam S-locus glycoprotein domain 233 337 IPR000858 GO:0048544
Phco9g01212 1033 Gene3D Transferase(Phosphotransferase) domain 1 791 997 - -
Phco9g01212 1033 SMART ntp_6 362 438 IPR003609 -
Phco9g01212 1033 SMART blect_4 50 177 IPR001480 -
Phco9g01212 1033 Pfam Protein tyrosine and serine/threonine kinase 718 984 IPR001245 GO:0004672|GO:0006468
Phco9g01212 1033 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 680 790 - -
Phco9g01212 1033 Pfam Domain of unknown function (DUF3403) 988 1033 IPR021820 GO:0004674
Phco9g01212 1033 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 137 1010 - -
Phco9g01212 1033 SUPERFAMILY Protein kinase-like (PK-like) 698 986 IPR011009 -
Phco9g01212 1033 CDD B_lectin 55 177 IPR001480 -
Phco9g01212 1033 ProSiteProfiles Protein kinase domain profile. 715 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01212 1033 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 791 994 - -
Phco9g01212 1033 CDD STKc_IRAK 721 986 - -
Phco9g01212 1033 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 201 IPR036426 -
Phco9g01212 1033 ProSiteProfiles Bulb-type lectin domain profile. 44 168 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01212 Phco-Chr9 11716284 11720929 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g01212 PK_Tyr_Ser-Thr 1.4e-46 CL0016