Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01205 ATGGCGAATGTGGCGATTCTTGAGCTCAATAGAAACTGTGCCAAGACAGTGGAAGAGATAGTGAAATTGGAAAGAAAGTTCTTTCCAAAACACGAATCACTAGCTTCATTCTTTCACGATGAACTGAAAAAGAACAGTGGATTGCTTTATCTTCACGTGGATTGCGAGCTTGCAGGCTACGTCATGTATTCTTGGCCTTCTGCCTTGTACGCCTCCATCACCAAGCTCGCAGTGAAGGAGCAATGGAGGGGACACGGCCACGGAGAGACTCTGTTGAAAGCAGCACTTGAGAAATGCAGGACAAGAAAAGTTTCGCGCATAATGCTTCACGTCGATCCCTTGAGGACTCCTGCAGATATTGAGTCAAAGCTAAAAAGATTGAAGTACTCAAAAGTTGATGAGTTTGTGGATGACATGGCGAGTGTCTTCTTTTATCCCTTGGGTTATCCTCCAAGAAGTGAGATACACAAAATTGCAACAACAATTACTCAAACTTTTGAGCTCACTTGGAAAACCATGAAGAAAAGGTGGATAGGTGAAGAAAATCTTTAA 552 0.4293 MANVAILELNRNCAKTVEEIVKLERKFFPKHESLASFFHDELKKNSGLLYLHVDCELAGYVMYSWPSALYASITKLAVKEQWRGHGHGETLLKAALEKCRTRKVSRIMLHVDPLRTPADIESKLKRLKYSKVDEFVDDMASVFFYPLGYPPRSEIHKIATTITQTFELTWKTMKKRWIGEENL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01205 183 CDD NAT_SF 54 110 - -
Phco9g01205 183 Gene3D - 1 118 - -
Phco9g01205 183 Pfam Acetyltransferase (GNAT) family 21 115 IPR000182 GO:0016747
Phco9g01205 183 Gene3D - 119 175 IPR036427 GO:0005515
Phco9g01205 183 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 4 167 IPR000182 GO:0016747
Phco9g01205 183 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 118 - -
Phco9g01205 183 Coils Coil 6 26 - -
Phco9g01205 183 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 17 118 IPR016181 -
Phco9g01205 183 SUPERFAMILY Bromodomain 119 176 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01205 Phco-Chr9 11649754 11651899 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco9g01205 Acetyltransf_1 1.5e-10 CL0257