Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01193 ATGGAGAAGCTTGTGATGGTGCATGGCAGAGATTTTCAAACTTTGTTGGGTTGTGACAGTGTAGTGGGTGCCCAGTGGAGCTTCAAGAGTGAACAGCTTTTGCCAGCTGTTACATGGCATACCACTTTCAAACACATTTTGGCTATAAAACCCTTCTTACTTCCAACTCTCTTCTCCACTCAGTGTTTTCAGAACCTTCACTCTGCTCTCCCCATACTCTTCTGCTCCCTTTTAAGGATGTTTCGCTCCTTAGGATTGATTGTGGGTCTTATGTTGGTTGTGGGGGTGGCTAATGCCCTGCCTTCCACCTCCAACTTTGATAAATTTTTCCAACCAAGTTGGGCTTTTGATCACTTCATTCACGAAGGAGATCTCCTCAAAATCAAACTTGACAATTATTCTGGGGCTGGTTTTGGATCCAAAAGCAAGTATATGTATGGGAAAGTGACCATCCAGCTTAAGCTGGTGGAAGGTGACTCTGCTGGGACTGTTACTGCTTTCTATATGTCATCGGAGGGTCCAAATCACAACGAGTTTGATTTTGAGTTTCTAGGCAACACCTCAGGGGAACCATACTCAGTCCAAACTAACTTGTATGTGAACGGAGTGGGCAACAGGGAACAGAGGCTTAACCTTTGGTTCGACCCTACCAAGGATTTCCACACATACTCTATCTTCTGGAATCAGCGTCAAGTTGTGTTTTTGGTGGATGAAACGCCAATAAGAGTGCACACAAACATGGAGCACAAGGGAATTCCTTATCCCAAAGACCAACCCATGGGTGTGTACAGTTCTATATGGAATGCTGACGATTGGGCCACCCAGGGTGGTCGTGTGAAGACGGATTGGAGCCACGCACCCTTTTTTGCCACCTTCAAGAACTTTGAAATCAATGCTTGTGAATGCCCTGTGTCAGTGGCTGCAATGGATAACTCTAAACGGTGCACCAGCAGTGTGGGTAAGAAATATTGGTGGGATGAGCCAAATTTGGCAGAACTCAACTTGCACCAGAGCCATCAGCTTATGTGGGTTAGGGCTAGACACATCTTCTATGACTATTGCTCTGACACTGCTAGGTTCCCAGTCACCCCAGCTGAGTGTGTCCATCACCGTCACAACTGA 1122 0.4626 MEKLVMVHGRDFQTLLGCDSVVGAQWSFKSEQLLPAVTWHTTFKHILAIKPFLLPTLFSTQCFQNLHSALPILFCSLLRMFRSLGLIVGLMLVVGVANALPSTSNFDKFFQPSWAFDHFIHEGDLLKIKLDNYSGAGFGSKSKYMYGKVTIQLKLVEGDSAGTVTAFYMSSEGPNHNEFDFEFLGNTSGEPYSVQTNLYVNGVGNREQRLNLWFDPTKDFHTYSIFWNQRQVVFLVDETPIRVHTNMEHKGIPYPKDQPMGVYSSIWNADDWATQGGRVKTDWSHAPFFATFKNFEINACECPVSVAAMDNSKRCTSSVGKKYWWDEPNLAELNLHQSHQLMWVRARHIFYDYCSDTARFPVTPAECVHHRHN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01193 373 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 103 367 IPR044791 GO:0004553
Phco9g01193 373 PRINTS Glycosyl hydrolase family 16 signature 194 207 IPR008264 GO:0004553|GO:0005975
Phco9g01193 373 PRINTS Glycosyl hydrolase family 16 signature 136 154 IPR008264 GO:0004553|GO:0005975
Phco9g01193 373 PRINTS Glycosyl hydrolase family 16 signature 212 229 IPR008264 GO:0004553|GO:0005975
Phco9g01193 373 FunFam Xyloglucan endotransglucosylase/hydrolase 93 369 - -
Phco9g01193 373 CDD GH16_XET 101 367 IPR016455 GO:0010411|GO:0016762|GO:0042546
Phco9g01193 373 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 37 292 IPR000757 GO:0004553|GO:0005975
Phco9g01193 373 Pfam Glycosyl hydrolases family 16 110 284 IPR000757 GO:0004553|GO:0005975
Phco9g01193 373 SUPERFAMILY Concanavalin A-like lectins/glucanases 106 371 IPR013320 -
Phco9g01193 373 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 321 367 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Phco9g01193 373 Gene3D - 92 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01193 Phco-Chr9 11396604 11399310 Dispersed/Transposed